RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 U3KQA8 63 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 CUL9Q8IWT3 2517 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 IGHV1OR21-1A0A087WYE8 117 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 A0A0J9YY10 115 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 CPED1A4D0V7 1026 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 E9PBE3 544 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 TNFSF14O43557 240 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 OR1F1O43749 312 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 LCMT2O60294 686 aaKnown RBP16.87■□□□□ 0.29
UPF3A-206ENST00000480362 NRP2O60462 931 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 KLHL41O60662 606 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 PEX11AO75192 247 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 PNLIPP16233 465 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 MAGP20916 626 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 GRK3P35626 688 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 HMGCS1Q01581 520 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 SPEM2Q0P670 501 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 IMPG1Q17R60 797 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 NKAIN2Q5VXU1 208 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 IRGCQ6NXR0 463 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 FIGLAQ6QHK4 219 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 MTDHQ86UE4 582 aaKnown RBP16.87■□□□□ 0.29
UPF3A-206ENST00000480362 PAQR7Q86WK9 346 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 PLD3Q8IV08 490 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 NCSTNQ92542 709 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 ACPTQ9BZG2 426 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 KLHL25Q9H0H3 589 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 FAM86C1Q9NVL1 165 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 EVA1BQ9NVM1 165 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 BTBD3Q9Y2F9 522 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 TSC22D4Q9Y3Q8 395 aa16.87■□□□□ 0.29
UPF3A-206ENST00000480362 TRBC2A0A5B9 178 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 EME2A4GXA9 379 aaPredicted RBP16.86■□□□□ 0.29
UPF3A-206ENST00000480362 ANKDD1BA6NHY2 528 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 MAGEB17A8MXT2 336 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 HAT1O14929 419 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 CAPN5O15484 640 aaPredicted RBP16.86■□□□□ 0.29
UPF3A-206ENST00000480362 ZW10O43264 779 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 DCTN3O75935 186 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 PVRP15151 417 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 LBPP18428 481 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 NCF2P19878 526 aaPredicted RBP16.86■□□□□ 0.29
UPF3A-206ENST00000480362 CSTF3Q12996 717 aaKnown RBP16.86■□□□□ 0.29
UPF3A-206ENST00000480362 NR6A1Q15406 480 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 AMZ1Q400G9 498 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 GALNTL6Q49A17 601 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 C10orf62Q5T681 223 aaPredicted RBP16.86■□□□□ 0.29
UPF3A-206ENST00000480362 METTL21CQ5VZV1 264 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 TMEM198Q66K66 360 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 FCRL6Q6DN72 434 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 GUSBP11Q6P575 273 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 DBX2Q6ZNG2 339 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 GBP7Q8N8V2 638 aaPredicted RBP16.86■□□□□ 0.29
UPF3A-206ENST00000480362 ZUFSPQ96AP4 578 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 RAB33BQ9H082 229 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 RHBGQ9H310 441 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 SEMA6CQ9H3T2 930 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 EPB41L1Q9H4G0 881 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 BRF2Q9HAW0 419 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 ANKMY1Q9P2S6 941 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 ADGRE2Q9UHX3 823 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 G3BP2Q9UN86 482 aaKnown RBP16.86■□□□□ 0.29
UPF3A-206ENST00000480362 TRIM33Q9UPN9 1127 aa16.86■□□□□ 0.29
UPF3A-206ENST00000480362 OR2A25A4D2G3 310 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 FOXE1O00358 373 aaPredicted RBP16.85■□□□□ 0.29
UPF3A-206ENST00000480362 FCHO1O14526 889 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 CDX4O14627 284 aaPredicted RBP16.85■□□□□ 0.29
UPF3A-206ENST00000480362 LSM1O15116 133 aaKnown RBP16.85■□□□□ 0.29
UPF3A-206ENST00000480362 CCDC22O60826 627 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 SERPINA6P08185 405 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 PRR35P0CG20 571 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 HSD3B1P14060 373 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 CDH3P22223 829 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 HSD3B2P26439 372 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 PIK3CBP42338 1070 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 GRK6P43250 576 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 SCTRP47872 440 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 RPS13P62277 151 aaKnown RBP16.85■□□□□ 0.29
UPF3A-206ENST00000480362 PHEXP78562 749 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 GPLD1P80108 840 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 DAB2P98082 770 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 NAA25Q14CX7 972 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 AP5B1Q2VPB7 878 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 PROX2Q3B8N5 592 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 ATP6AP1LQ52LC2 224 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 SPDYAQ5MJ70 313 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 C6orf136Q5SQH8 315 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 PERM1Q5SV97 790 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 VN1R5Q7Z5H4 357 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.85■□□□□ 0.29
UPF3A-206ENST00000480362 TBC1D19Q8N5T2 526 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 ANKRD53Q8N9V6 530 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 PPP3R2Q96LZ3 170 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 TGM7Q96PF1 710 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 LRRC37BQ96QE4 947 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 DMRT3Q9NQL9 472 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 SEMA4GQ9NTN9 838 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 NCDNQ9UBB6 729 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 EPHA6Q9UF33 1036 aa16.85■□□□□ 0.29
UPF3A-206ENST00000480362 KLK4Q9Y5K2 254 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms