RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 ADGRE3Q9BY15 652 aa4.92□□□□□ -1.62
CAPN9-204ENST00000480004 PITPNM3Q9BZ71 974 aa4.92□□□□□ -1.62
CAPN9-204ENST00000480004 PITHD1Q9GZP4 211 aaPredicted RBP4.92□□□□□ -1.62
CAPN9-204ENST00000480004 POLR1EQ9GZS1 481 aaKnown RBP4.92□□□□□ -1.62
CAPN9-204ENST00000480004 CHRNA10Q9GZZ6 450 aa4.92□□□□□ -1.62
CAPN9-204ENST00000480004 QRSL1Q9H0R6 528 aaKnown RBP4.92□□□□□ -1.62
CAPN9-204ENST00000480004 SLC26A1Q9H2B4 701 aa4.92□□□□□ -1.62
CAPN9-204ENST00000480004 SRMSQ9H3Y6 488 aa4.92□□□□□ -1.62
CAPN9-204ENST00000480004 RASSF1Q9NS23 344 aa4.92□□□□□ -1.62
CAPN9-204ENST00000480004 IRAK4Q9NWZ3 460 aa4.92□□□□□ -1.62
CAPN9-204ENST00000480004 GALNT8Q9NY28 637 aa4.92□□□□□ -1.62
CAPN9-204ENST00000480004 TAS2R14Q9NYV8 317 aa4.92□□□□□ -1.62
CAPN9-204ENST00000480004 PTGFRNQ9P2B2 879 aa4.92□□□□□ -1.62
CAPN9-204ENST00000480004 NFKBIL1Q9UBC1 381 aaPredicted RBP4.92□□□□□ -1.62
CAPN9-204ENST00000480004 ACSL5Q9ULC5 683 aa4.92□□□□□ -1.62
CAPN9-204ENST00000480004 DCHS2Q6V1P9 2916 aa4.92□□□□□ -1.62
CAPN9-204ENST00000480004 ANKRD12Q6UB98 2062 aa4.92□□□□□ -1.62
CAPN9-204ENST00000480004 CCDC88CQ9P219 2028 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 USP27XA6NNY8 438 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 ANKRD66B4E2M5 251 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 NPIPA5E9PKD4 350 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 BIN1O00499 593 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 PRPSAP2O60256 369 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 KLK8O60259 260 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 CNOT3O75175 753 aaKnown RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 POP7O75817 140 aaKnown RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 TOXO94900 526 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 WDPCPO95876 746 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 ONECUT2O95948 504 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 CALB1P05937 261 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 PRR35P0CG20 571 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 ZSCAN22P10073 491 aaPredicted RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 OSMP13725 252 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 CXCR2P25025 360 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 PON1P27169 355 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 GSCP56915 257 aaPredicted RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 STX17P56962 302 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 NKX6-1P78426 367 aaPredicted RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 TFF3Q07654 80 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 AP1B1Q10567 949 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 OLIG2Q13516 323 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 ZNF766Q5HY98 468 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 ERMARDQ5T6L9 678 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 TAF3Q5VWG9 929 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 MBNL2Q5VZF2 373 aaKnown RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 METRNLQ641Q3 311 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 TXNRD3NBQ6F5E7 133 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 PAMR1Q6UXH9 720 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 CDHR3Q6ZTQ4 885 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 NDUFAF7Q7L592 441 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 C11orf96Q7Z7L8 435 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 CREBRFQ8IUR6 639 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 PSTKQ8IV42 348 aaKnown RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 ATPAF2Q8N5M1 289 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 CPSF7Q8N684 471 aaKnown RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 DTX3Q8N9I9 347 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 ACVR1CQ8NER5 493 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 LPCAT1Q8NF37 534 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 GDAP1Q8TB36 358 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 BRIX1Q8TDN6 353 aaKnown RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 LCN9Q8WX39 176 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 PSMF1Q92530 271 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 SMARCE1Q969G3 411 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 C12orf66Q96MD2 445 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 PPM1MQ96MI6 270 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 VPS35Q96QK1 796 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 TUBGCP2Q9BSJ2 902 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 CCM2Q9BSQ5 444 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 BTBD2Q9BX70 525 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 TDRD1Q9BXT4 1180 aaKnown RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 SCAND2PQ9GZW5 306 aaPredicted RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 SPRTNQ9H040 489 aaPredicted RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 LIME1Q9H400 295 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 DHX35Q9H5Z1 703 aaKnown RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 ZWILCHQ9H900 591 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 ARNT2Q9HBZ2 717 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 PCDH9Q9HC56 1237 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 ZNF160Q9HCG1 818 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 PCDH18Q9HCL0 1135 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 ARFGAP3Q9NP61 516 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 NT5MQ9NPB1 228 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 NLRC4Q9NPP4 1024 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 DHCR7Q9UBM7 475 aaKnown RBP4.91□□□□□ -1.62
CAPN9-204ENST00000480004 AMACRQ9UHK6 382 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 NPIPA1Q9UND3 350 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 PLA2G2DQ9UNK4 145 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 PSMD13Q9UNM6 376 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 CHKBQ9Y259 395 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 AKAP9Q99996 3911 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 SPTBP11277 2137 aa4.91□□□□□ -1.62
CAPN9-204ENST00000480004 JMJD1CQ15652 2540 aa4.9□□□□□ -1.62
CAPN9-204ENST00000480004 FN1P02751 2386 aaKnown RBP4.9□□□□□ -1.62
CAPN9-204ENST00000480004 A0A1B0GX78 115 aa4.9□□□□□ -1.63
CAPN9-204ENST00000480004 NKX2-6A6NCS4 301 aa4.9□□□□□ -1.63
CAPN9-204ENST00000480004 VSTM5A8MXK1 200 aa4.9□□□□□ -1.63
CAPN9-204ENST00000480004 H3BMH7 237 aa4.9□□□□□ -1.63
CAPN9-204ENST00000480004 DDX3XO00571 662 aaKnown RBP eCLIP4.9□□□□□ -1.63
CAPN9-204ENST00000480004 ADAM10O14672 748 aa4.9□□□□□ -1.63
CAPN9-204ENST00000480004 CCP110O43303 1012 aa4.9□□□□□ -1.63
CAPN9-204ENST00000480004 MTX2O75431 263 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms