RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ASZ1Q8WWH4 475 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 LPGAT1Q92604 370 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 TSPAN17Q96FV3 270 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 VPS39Q96JC1 886 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 FOPNLQ96NB1 174 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 RAB3IPQ96QF0 476 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 WDR83Q9BRX9 315 aaKnown RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 BOCQ9BWV1 1114 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 TCEAL2Q9H3H9 227 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 GALNT8Q9NY28 637 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 TAS2R13Q9NYV9 303 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 TAAR2Q9P1P5 351 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 FBLN5Q9UBX5 448 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 FTSJ1Q9UET6 329 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 TRMT6Q9UJA5 497 aaKnown RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 KCNK6Q9Y257 313 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 LRCH1Q9Y2L9 728 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 COA3Q9Y2R0 106 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-209ENST00000479532 HEBP2Q9Y5Z4 205 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 GON4LQ3T8J9 2241 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 PIKFYVEQ9Y2I7 2098 aa6.02□□□□□ -1.45
SF3B1-209ENST00000479532 CACNA1HO95180 2353 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 KIR2DS5A0A0G2JLQ3 304 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 A0A0G2JNG1 304 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 EXOC1LA0A1B0GW35 172 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 FAM159BA6NKW6 160 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 ZNF561-AS1K7EIQ3 104 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 KIR2DS3K7RE56 304 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 ETV2O00321 342 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 CDX4O14627 284 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 YY2O15391 372 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 RIPK2O43353 540 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 HNRNPCL1O60812 293 aaKnown RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 KRT38O76015 456 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 HAUS5O94927 633 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 FKBP9O95302 570 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 LDOC1O95751 146 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 AHSGP02765 367 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 RPSAP08865 295 aaKnown RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 MSL3P1P0C860 447 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 CBSLP0DN79 551 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 F3P13726 295 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 ITGB6P18564 788 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 TGM1P22735 817 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 CNTFP26441 200 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 AK4P27144 223 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 NDUFS1P28331 727 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 CA5AP35218 305 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 CBSP35520 551 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 MSH2P43246 934 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 MAPK9P45984 424 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 PPM1FP49593 454 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 RGS4P49798 205 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 SERPINB9P50453 376 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 LINC00310P59036 64 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 GPX6P59796 221 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 CHRNEQ04844 493 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 KRTAP1-1Q07627 177 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 NFE2L1Q14494 772 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 KIR3DS1Q14943 382 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 KIR2DS5Q14953 304 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 SHBQ15464 509 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 INAQ16352 499 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 BCL2A1Q16548 175 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 PLEKHS1Q5SXH7 462 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 AGAP9Q5VTM2 703 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 GALNT18Q6P9A2 607 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 TTC23LQ6PF05 361 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 WASH2PQ6VEQ5 465 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 FKBP9P1Q75LS8 142 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 ZNF547Q8IVP9 402 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 UNC5BQ8IZJ1 945 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 RAB42Q8N4Z0 105 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 ZBTB2Q8N680 514 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 ARL10Q8N8L6 244 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 CCDC197Q8NCU1 140 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 NUP43Q8NFH3 380 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 OR2I1PQ8NGU4 316 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 CHTF18Q8WVB6 975 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 SKA2Q8WVK7 121 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 DYDC1Q8WWB3 177 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 KCNJ9Q92806 393 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 NAT6Q93015 286 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 SH3KBP1Q96B97 665 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 CXorf40BQ96DE9 158 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 ELMO2Q96JJ3 720 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 CNDP2Q96KP4 475 aaKnown RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 CATSPER2Q96P56 530 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 NR1H4Q96RI1 486 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 NDNQ99608 321 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 NSRP1Q9H0G5 558 aaKnown RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 P2RY12Q9H244 342 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 EPB41L4BQ9H329 900 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 RHOJQ9H4E5 214 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 COG4Q9H9E3 785 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 PPCSQ9HAB8 311 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 SARS2Q9NP81 518 aaKnown RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 WASH6PQ9NQA3 447 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 UCKL1Q9NWZ5 548 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms