RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ZNF300Q96RE9 604 aaPredicted RBP23.82■■□□□ 1.4
SYNGAP1-206ENST00000479510 MROQ9BYG7 248 aa23.82■■□□□ 1.4
SYNGAP1-206ENST00000479510 NFKBIL1Q9UBC1 381 aaPredicted RBP23.82■■□□□ 1.4
SYNGAP1-206ENST00000479510 DGKBQ9Y6T7 804 aa23.82■■□□□ 1.4
SYNGAP1-206ENST00000479510 hCG_2039718K7EN88 272 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 SCAMP2O15127 329 aaKnown RBP23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 IDUAP35475 653 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 MAPK9P45984 424 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 SFSWAPQ12872 951 aaKnown RBP23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 FADDQ13158 208 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 ATP1A4Q13733 1029 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 CLCA4Q14CN2 919 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 XKR6Q5GH73 641 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 LDLRAP1Q5SW96 308 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 GAREM2Q75VX8 874 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 ELMO1Q92556 727 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 ITPKCQ96DU7 683 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 DUSP26Q9BV47 211 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 GABARAPL3Q9BY60 117 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 ABCG8Q9H221 673 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 CHST8Q9H2A9 424 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 ZDHHC6Q9H6R6 413 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 TPT1P8Q9HAU6 139 aa23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 MBD1Q9UIS9 605 aaPredicted RBP23.81■■□□□ 1.4
SYNGAP1-206ENST00000479510 PSIP1O75475 530 aaKnown RBP23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 CYP2A6P11509 494 aaPredicted RBP23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 CYP4F8P98187 520 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 NOGQ13253 232 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 BRAT1Q6PJG6 821 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 DPY19L3Q6ZPD9 716 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 THOC6Q86W42 341 aaKnown RBP23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 SLC22A15Q8IZD6 547 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 FCGR1BQ92637 280 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 SIGLEC11Q96RL6 698 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 ATG10Q9H0Y0 220 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 ACOT13Q9NPJ3 140 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 ADPRHL2Q9NX46 363 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 THUMPD1Q9NXG2 353 aaKnown RBP23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 PADI2Q9Y2J8 665 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 WASH3PC4AMC7 463 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 CREMQ03060 361 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 OXA1LQ15070 435 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 ADPRMQ3LIE5 342 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 IQCCQ4KMZ1 466 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 EGFLAMQ63HQ2 1017 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 VTCN1Q7Z7D3 282 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 REM2Q8IYK8 340 aaPredicted RBP23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 ATG16L2Q8NAA4 619 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 ZNF540Q8NDQ6 660 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 C7orf34Q96L11 122 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 CFHR5Q9BXR6 569 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 PCDHGB3Q9Y5G1 929 aa23.8■■□□□ 1.4
SYNGAP1-206ENST00000479510 CENPFP49454 3210 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 FAM20BO75063 409 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 MT-ND2P03891 347 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 CYP4B1P13584 511 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 CD22P20273 847 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 CDH3P22223 829 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 PCGF2P35227 344 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 MASP1P48740 699 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 PXNP49023 591 aaPredicted RBP23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 PNLIPRP1P54315 467 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 NPRL3Q12980 569 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 TEAD4Q15561 434 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 TRIM16LQ309B1 348 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 CPTPQ5TA50 214 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 CXorf40BQ96DE9 158 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 FAM83DQ9H4H8 585 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 SGTAO43765 313 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 CPSF4O95639 269 aaKnown RBP23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 LAMP1P11279 417 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 HLA-FP30511 346 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 HPCAL1P37235 193 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 PSMD7P51665 324 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 IL1RL1Q01638 556 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 DOC2AQ14183 400 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 SERPINA13PQ6UXR4 307 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 GDPD4Q6W3E5 623 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 ZBTB46Q86UZ6 589 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 ZBTB8BQ8NAP8 495 aaPredicted RBP23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 DYNC2LI1Q8TCX1 351 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 HRASLS5Q96KN8 279 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 SPG21Q9NZD8 308 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 SCN5AQ14524 2016 aa23.79■■□□□ 1.4
SYNGAP1-206ENST00000479510 C1orf226A1L170 272 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 CLDN24A6NM45 220 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 LEFTY2O00292 366 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 SUV39H1O43463 412 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 VIPR1P32241 457 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 MAP2K4P45985 399 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 ELOAQ14241 798 aaKnown RBP23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 LAPTM4AQ15012 233 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 SPIN4Q56A73 249 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 UBE2UQ5VVX9 321 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 MLIPQ5VWP3 458 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 LAIR1Q6GTX8 287 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 TMC8Q8IU68 726 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 CMTM8Q8IZV2 173 aa23.78■■□□□ 1.4
SYNGAP1-206ENST00000479510 COQ8BQ96D53 544 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms