RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TBC1D19Q8N5T2 526 aa14.78□□□□□ -0.04
C9orf3-217ENST00000479161 RERGQ96A58 199 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-217ENST00000479161 CABS1Q96KC9 395 aa14.78□□□□□ -0.04
C9orf3-217ENST00000479161 ATOH8Q96SQ7 321 aa14.78□□□□□ -0.04
C9orf3-217ENST00000479161 EGFL8Q99944 293 aa14.78□□□□□ -0.04
C9orf3-217ENST00000479161 EPB41L4BQ9H329 900 aa14.78□□□□□ -0.04
C9orf3-217ENST00000479161 EHD1Q9H4M9 534 aa14.78□□□□□ -0.04
C9orf3-217ENST00000479161 PELI2Q9HAT8 420 aa14.78□□□□□ -0.04
C9orf3-217ENST00000479161 CUTCQ9NTM9 273 aa14.78□□□□□ -0.04
C9orf3-217ENST00000479161 CUEDC1Q9NWM3 386 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-217ENST00000479161 NUDT4Q9NZJ9 180 aa14.78□□□□□ -0.04
C9orf3-217ENST00000479161 COPG2Q9UBF2 871 aa14.78□□□□□ -0.04
C9orf3-217ENST00000479161 IL17BQ9UHF5 180 aa14.78□□□□□ -0.04
C9orf3-217ENST00000479161 CDC14AQ9UNH5 594 aa14.78□□□□□ -0.04
C9orf3-217ENST00000479161 PADI2Q9Y2J8 665 aa14.78□□□□□ -0.04
C9orf3-217ENST00000479161 LOC105369274A0A096LPK9 316 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 LOC102723532A0A0G2JNH3 316 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 TRBC2A0A5B9 178 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 TUBBP07437 444 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 CTSBP07858 339 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 MYBL2P10244 700 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 GNAZP19086 355 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 TFEBP19484 476 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 GSTM2P28161 218 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 AHRP35869 848 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 DLG1Q12959 904 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 E2F2Q14209 437 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 NCF4Q15080 339 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 UAP1Q16222 522 aaPredicted RBP14.77□□□□□ -0.05
C9orf3-217ENST00000479161 MRPL14Q6P1L8 145 aaKnown RBP14.77□□□□□ -0.05
C9orf3-217ENST00000479161 KLC3Q6P597 504 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 FAM198BQ6UWH4 519 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 OR4N4Q8N0Y3 316 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 UBTD2Q8WUN7 234 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 SLC5A11Q8WWX8 675 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 THAP4Q8WY91 577 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 TTC9Q92623 222 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 NEIL2Q969S2 332 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 PYCR2Q96C36 320 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 CRELD1Q96HD1 420 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 GPR78Q96P69 363 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 NT5DC2Q9H857 520 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 WDR54Q9H977 334 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 RNF112Q9ULX5 631 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 TMCO1Q9UM00 188 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 SLC22A14Q9Y267 594 aa14.77□□□□□ -0.05
C9orf3-217ENST00000479161 SMG1Q96Q15 3661 aaKnown RBP14.77□□□□□ -0.05
C9orf3-217ENST00000479161 POC1B-GALNT4F8VUJ3 575 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 HAT1O14929 419 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 PRPF4O43172 522 aaKnown RBP eCLIP14.76□□□□□ -0.052e-7■■■■□ 25.5
C9orf3-217ENST00000479161 KLK8O60259 260 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 STK16O75716 305 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 CXCR2P25025 360 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 GCAP28676 217 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 KCNC1P48547 511 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 CDC20Q12834 499 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 PWP1Q13610 501 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 BMPR2Q13873 1038 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 NDUFA9Q16795 377 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 UGT8Q16880 541 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 TSNAXIP1Q2TAA8 658 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 NIPAL1Q6NVV3 410 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 FAM199XQ6PEV8 388 aaPredicted RBP14.76□□□□□ -0.05
C9orf3-217ENST00000479161 TTLL10Q6ZVT0 673 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 OVCH1Q7RTY7 1134 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 TDRPQ86YL5 185 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 SPATA6LQ8N4H0 392 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 CSNK1A1LQ8N752 337 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 MFSD9Q8NBP5 474 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 CAMKVQ8NCB2 501 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 ACMSDQ8TDX5 336 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 NXNL1Q96CM4 212 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 WDR34Q96EX3 536 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 IP6K3Q96PC2 410 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 ACTL8Q9H568 366 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 ALG9Q9H6U8 611 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 IRAK4Q9NWZ3 460 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 DHCR7Q9UBM7 475 aaKnown RBP14.76□□□□□ -0.05
C9orf3-217ENST00000479161 NXT1Q9UKK6 140 aaKnown RBP14.76□□□□□ -0.05
C9orf3-217ENST00000479161 TCFL5Q9UL49 500 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 DYRK1BQ9Y463 629 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 COL6A6A6NMZ7 2263 aa14.76□□□□□ -0.05
C9orf3-217ENST00000479161 IGLV3-12A0A075B6K2 115 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 IQANK1A0A1B0GTG1 560 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 MAP2K7O14733 419 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 TAPBPO15533 448 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 NRP2O60462 931 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 KLF7O75840 302 aaPredicted RBP14.75□□□□□ -0.05
C9orf3-217ENST00000479161 S100BP04271 92 aaPredicted RBP14.75□□□□□ -0.05
C9orf3-217ENST00000479161 RBP1P09455 135 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 CDH1P12830 882 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 MTHFD2P13995 350 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 CASP2P42575 452 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 CDC16Q13042 620 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 TBCCQ15814 346 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 ATG9BQ674R7 924 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 LCN10Q6JVE6 187 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 EMBQ6PCB8 327 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 NXPE4Q6UWF7 544 aa14.75□□□□□ -0.05
C9orf3-217ENST00000479161 VN1R4Q7Z5H5 301 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms