RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 CAPZBP47756 277 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 DUSP3P51452 185 aaPredicted RBP11.24□□□□□ -0.61
PDCD11-204ENST00000478543 EPHA4P54764 986 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 PKNOX1P55347 436 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 CBX1P83916 185 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 MEF2AQ02078 507 aaPredicted RBP11.24□□□□□ -0.61
PDCD11-204ENST00000478543 TARDBPQ13148 414 aaKnown RBP eCLIP11.24□□□□□ -0.61
PDCD11-204ENST00000478543 DOC2AQ14183 400 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 KIAA1614Q5VZ46 1190 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 CLEC6AQ6EIG7 209 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 LETMD1Q6P1Q0 360 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 KLHL35Q6PF15 583 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 SPESP1Q6UW49 350 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 NXPE4Q6UWF7 544 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 LRRC69Q6ZNQ3 347 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 SLCO4C1Q6ZQN7 724 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 ADCK2Q7Z695 626 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 SPRED1Q7Z699 444 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 TMPRSS12Q86WS5 348 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 SPACA3Q8IXA5 215 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 CDYL2Q8N8U2 506 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 OR2L3Q8NG85 312 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 OR6C4Q8NGE1 309 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 FLVCR1-AS1Q8TAF5 88 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 IFI44Q8TCB0 444 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 NAT6Q93015 286 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 SLC22A18Q96BI1 424 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 CHMP6Q96FZ7 201 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 PPM1MQ96MI6 270 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 C7orf26Q96N11 449 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 OR2A14Q96R47 310 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 CCDC3Q9BQI4 270 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 ILKAPQ9H0C8 392 aaPredicted RBP11.24□□□□□ -0.61
PDCD11-204ENST00000478543 KLHL25Q9H0H3 589 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 ABCG4Q9H172 646 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 PRM3Q9NNZ6 103 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 SLC6A20Q9NP91 592 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 EVA1BQ9NVM1 165 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 KLHL3Q9UH77 587 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 ZNF225Q9UK10 706 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 TIMM22Q9Y584 194 aa11.24□□□□□ -0.61
PDCD11-204ENST00000478543 SPTA1P02549 2419 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 A0A0J9YY10 115 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 EME2A4GXA9 379 aaPredicted RBP11.23□□□□□ -0.61
PDCD11-204ENST00000478543 H7BY64 318 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 ERVH48-1M5A8F1 160 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 FFAR3O14843 346 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 AZIN1O14977 448 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 GPR42O15529 346 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 DUX1O43812 170 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 CLDN9O95484 217 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 ESRRBO95718 433 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 RPLP0P05388 317 aaKnown RBP11.23□□□□□ -0.61
PDCD11-204ENST00000478543 CAPN1P07384 714 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 EBLN1P0CF75 366 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 C1GALT1C1LP0DN25 315 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 HGFP14210 728 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 PVRP15151 417 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 CD22P20273 847 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 SERPINB3P29508 390 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 HMOX2P30519 316 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 GPR3P46089 330 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 LSSP48449 732 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 RPL14P50914 215 aaKnown RBP11.23□□□□□ -0.61
PDCD11-204ENST00000478543 FOXA1P55317 472 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 GFERP55789 205 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 PRDX1Q06830 199 aaKnown RBP11.23□□□□□ -0.61
PDCD11-204ENST00000478543 GALNT1Q10472 559 aaPredicted RBP11.23□□□□□ -0.61
PDCD11-204ENST00000478543 SLBPQ14493 270 aaKnown RBP eCLIP11.23□□□□□ -0.61
PDCD11-204ENST00000478543 NR1D2Q14995 579 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 RTP5Q14D33 572 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 CPSF6Q16630 551 aaKnown RBP eCLIP11.23□□□□□ -0.61
PDCD11-204ENST00000478543 SLC5A12Q1EHB4 618 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 TCHHL1Q5QJ38 904 aaPredicted RBP11.23□□□□□ -0.61
PDCD11-204ENST00000478543 ATG9BQ674R7 924 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 FAM92BQ6ZTR7 304 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 USP53Q70EK8 1073 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 GRAMD1AQ96CP6 724 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 PRAP1Q96NZ9 151 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 TGM7Q96PF1 710 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 ZNF317Q96PQ6 595 aaPredicted RBP11.23□□□□□ -0.61
PDCD11-204ENST00000478543 DPH7Q9BTV6 452 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 NTMT1Q9BV86 223 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 SPNS1Q9H2V7 528 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 PELI2Q9HAT8 420 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 TRPS1Q9UHF7 1281 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 POMT2Q9UKY4 750 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 TRAF6Q9Y4K3 522 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 ENTPD2Q9Y5L3 495 aa11.23□□□□□ -0.61
PDCD11-204ENST00000478543 IGKV1-8A0A0C4DH67 115 aa11.22□□□□□ -0.61
PDCD11-204ENST00000478543 GMNCA6NCL1 334 aa11.22□□□□□ -0.61
PDCD11-204ENST00000478543 MATN2O00339 956 aa11.22□□□□□ -0.61
PDCD11-204ENST00000478543 CAPN5O15484 640 aaPredicted RBP11.22□□□□□ -0.61
PDCD11-204ENST00000478543 KIF1CO43896 1103 aaKnown RBP11.22□□□□□ -0.61
PDCD11-204ENST00000478543 NRP2O60462 931 aa11.22□□□□□ -0.61
PDCD11-204ENST00000478543 BRINP1O60477 761 aa11.22□□□□□ -0.61
PDCD11-204ENST00000478543 SHOX2O60902 331 aaPredicted RBP11.22□□□□□ -0.61
PDCD11-204ENST00000478543 SKAP2O75563 359 aaPredicted RBP11.22□□□□□ -0.61
PDCD11-204ENST00000478543 ENO1P06733 434 aaKnown RBP11.22□□□□□ -0.61
PDCD11-204ENST00000478543 PCNAP12004 261 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms