RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 KCNMB4Q86W47 210 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 CAMKVQ8NCB2 501 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 PPFIBP2Q8ND30 876 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 OR1N1Q8NGS0 311 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 GIMAP7Q8NHV1 300 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 CD200R1Q8TD46 325 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 C8orf44Q96CB5 159 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 HIST1H2AHQ96KK5 128 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 MAGEB10Q96LZ2 347 aaPredicted RBP13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 CCDC138Q96M89 665 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 HIST1H2AJQ99878 128 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 H2AFJQ9BTM1 129 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 RNF32Q9H0A6 362 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 ABI3Q9P2A4 366 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 PTGFRNQ9P2B2 879 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 MKL2Q9ULH7 1088 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 DOPEY1Q5JWR5 2465 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 UNC79Q9P2D8 2635 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 PCSK5Q92824 1860 aa13.72□□□□□ -0.21
SMARCE1-209ENST00000478349 LOC102723996A0A087X1L8 192 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 A0A0A6YYC8 382 aaPredicted RBP13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 A0A1B0GUH1 482 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 I3L1I5 382 aaPredicted RBP13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 HAT1O14929 419 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 SLC16A5O15375 505 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 NSA2O95478 260 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 SLC35G6P0C7Q6 338 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 IMPA1P29218 277 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 SOX11P35716 441 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 MAGEA3P43357 314 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 TBPL1P62380 186 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 CCZ1BP86790 482 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 CCZ1P86791 482 aaPredicted RBP13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 EEF1A2Q05639 463 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 ESPL1Q14674 2120 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 MFSD4BQ5TF39 518 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 ABHD17BQ5VST6 288 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 NIPAL1Q6NVV3 410 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 KIAA0408Q6ZU52 694 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 C17orf64Q86WR6 236 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 CPNE9Q8IYJ1 553 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 DTWD1Q8N5C7 304 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 AMER3Q8N944 861 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 BRIX1Q8TDN6 353 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 TRIM56Q9BRZ2 755 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 HAUS8Q9BT25 410 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 AARSD1Q9BTE6 412 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 TRIM54Q9BYV2 358 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 ZNF700Q9H0M5 742 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 ANKHQ9HCJ1 492 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 GALPQ9UBC7 116 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 NTNG1Q9Y2I2 539 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 CSAG2Q9Y5P2 127 aa13.71□□□□□ -0.21
SMARCE1-209ENST00000478349 PCM1Q15154 2024 aa13.71□□□□□ -0.22
SMARCE1-209ENST00000478349 KCNE1BA0A087WTH5 132 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 H7BY64 318 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 ZSCAN12O43309 604 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 MED26O95402 600 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 CRYABP02511 175 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 IL10P22301 178 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 AGTR2P50052 363 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 TNFSF10P50591 281 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 Q0VFX4 171 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 CRYMQ14894 314 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 MINDY4Q4G0A6 757 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 HSP90AA5PQ58FG0 334 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 FAAH2Q6GMR7 532 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 PIWIL4Q7Z3Z4 852 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 TMEM151BQ8IW70 566 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 ZC3H7AQ8IWR0 971 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 SLC34A3Q8N130 599 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 NAT8LQ8N9F0 302 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 ACTRT1Q8TDG2 376 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 ATL1Q8WXF7 558 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 HAS2Q92819 552 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 PRAP1Q96NZ9 151 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 SLC30A3Q99726 388 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 SLX1AQ9BQ83 275 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 PARVBQ9HBI1 364 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 IARS2Q9NSE4 1012 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 STOX2Q9P2F5 926 aaPredicted RBP13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 ASIC3Q9UHC3 531 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 CORO1CQ9ULV4 474 aaPredicted RBP13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 OSGIN2Q9Y236 505 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 SHANK1Q9Y566 2161 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 NOTCH2Q04721 2471 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 FER1L5A0AVI2 2057 aa13.7□□□□□ -0.22
SMARCE1-209ENST00000478349 CES2O00748 559 aa13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 FOXS1O43638 330 aa13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 KLHL18O94889 574 aa13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 MLYCDO95822 493 aa13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 AP1S2P56377 157 aa13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 YBX1P67809 324 aaKnown RBP13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 RBPJQ06330 500 aa13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.69□□□□□ -0.224e-7■■□□□ 13.2
SMARCE1-209ENST00000478349 SPANXN3Q5MJ09 141 aa13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 CAPN13Q6MZZ7 669 aaPredicted RBP13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 MTFR2Q6P444 385 aa13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 ZNF549Q6P9A3 640 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms