RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SCELO95171 688 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 FKBP9O95302 570 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 ZCCHC18P0CG32 403 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 PCNAP12004 261 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 BMP2P12643 396 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 TCN1P20061 433 aaPredicted RBP7.65□□□□□ -1.18
VMA21-203ENST00000477649 CD22P20273 847 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 TIA1P31483 386 aaKnown RBP eCLIP7.65□□□□□ -1.18
VMA21-203ENST00000477649 IGFALSP35858 605 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 GSK3BP49841 420 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 NEK2P51955 445 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 MRPS35P82673 323 aaKnown RBP7.65□□□□□ -1.18
VMA21-203ENST00000477649 PRKCQQ04759 706 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 ZNF763Q0D2J5 394 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 ABHD18Q0P651 414 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 CCINQ13939 588 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 LRRC32Q14392 662 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 KRT33BQ14525 404 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 PTGR1Q14914 329 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 DUOXA1Q1HG43 343 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 CCSMST1Q4G0I0 132 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 RUNDC3AQ59EK9 446 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 PRRC2BQ5JSZ5 2229 aaKnown RBP7.65□□□□□ -1.18
VMA21-203ENST00000477649 SPANXN4Q5MJ08 99 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 TLDC1Q6P9B6 456 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 SLC2A7Q6PXP3 512 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 SUSD1Q6UWL2 747 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 ABRAXAS1Q6UWZ7 409 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 TMIGD1Q6UXZ0 262 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 FAM83HQ6ZRV2 1179 aaPredicted RBP7.65□□□□□ -1.18
VMA21-203ENST00000477649 PAGE2Q7Z2X7 111 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 FAM129CQ86XR2 697 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 PDSS2Q86YH6 399 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 KIAA2013Q8IYS2 634 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 RNF148Q8N7C7 305 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 PAPD5Q8NDF8 572 aaKnown RBP7.65□□□□□ -1.18
VMA21-203ENST00000477649 HIPK4Q8NE63 616 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 OR4K1Q8NGD4 311 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 OR2L8Q8NGY9 312 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 HUS1BQ8NHY5 278 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 DNAJB14Q8TBM8 379 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 NRG4Q8WWG1 115 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 NELL1Q92832 810 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 SH3KBP1Q96B97 665 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 SLC22A18Q96BI1 424 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 COQ8BQ96D53 544 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 MTFMTQ96DP5 389 aaKnown RBP7.65□□□□□ -1.18
VMA21-203ENST00000477649 APIPQ96GX9 242 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 ZNF764Q96H86 408 aaPredicted RBP7.65□□□□□ -1.18
VMA21-203ENST00000477649 NSMCE2Q96MF7 247 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 WDR92Q96MX6 357 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 HBEGFQ99075 208 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 LGR4Q9BXB1 951 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 UGT2B28Q9BY64 529 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 BHLHE41Q9C0J9 482 aaPredicted RBP7.65□□□□□ -1.18
VMA21-203ENST00000477649 PCED1AQ9H1Q7 454 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 KIR3DX1Q9H7L2 352 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 IL1RL2Q9HB29 575 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 DMRT3Q9NQL9 472 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 GEMIN8Q9NWZ8 242 aaKnown RBP7.65□□□□□ -1.18
VMA21-203ENST00000477649 TRNAU1APQ9NX07 287 aaKnown RBP7.65□□□□□ -1.18
VMA21-203ENST00000477649 USP36Q9P275 1121 aaKnown RBP7.65□□□□□ -1.18
VMA21-203ENST00000477649 SLC23A2Q9UGH3 650 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 SERGEFQ9UGK8 458 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 TCF20Q9UGU0 1960 aaKnown RBP7.65□□□□□ -1.18
VMA21-203ENST00000477649 ATP6V1HQ9UI12 483 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 BTNL2Q9UIR0 455 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 MCM8Q9UJA3 840 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 RIMS3Q9UJD0 308 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 ADAM29Q9UKF5 820 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 PCOLCE2Q9UKZ9 415 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 DTNAQ9Y4J8 743 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 OR1A2Q9Y585 309 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 PCDHB11Q9Y5F2 797 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 PCDHGA2Q9Y5H1 932 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 PRSS38A1L453 326 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 ANKDD1BA6NHY2 528 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 MAGEB17A8MXT2 336 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 FAM220BPB1ANY3 271 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 C10orf142B7Z368 130 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 PRAMEF26H0Y7S4 382 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 RNASET2O00584 256 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 RFXANKO14593 260 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 SCAMP2O15127 329 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 ARPC2O15144 300 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 TBX19O60806 448 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 ZNF217O75362 1048 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 SORBS2O94875 1100 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 RETP07949 1114 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 ANXA6P08133 673 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 ANXA4P09525 319 aaPredicted RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 ACP5P13686 325 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 COX7A2P14406 83 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 IGFBP4P22692 258 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 FASP25445 335 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 SHMT2P34897 504 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 GRK3P35626 688 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 GRIA3P42263 894 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 RABIFP47224 123 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 POLE2P56282 527 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms