RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 L3HYPDHQ96EM0 354 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 TSNARE1Q96NA8 513 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 FCRL4Q96PJ5 515 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 ZPBPQ9BS86 351 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 ERVK-6Q9BXR3 956 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 PILRAQ9UKJ1 303 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 TEX51A0A1B0GUA7 166 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 E7EQ34 232 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 H3BMH7 237 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 K7EPI3 171 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 TAF4O00268 1085 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 OR7A17O14581 309 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 ATP8B1O43520 1251 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 KIAA0754O94854 1291 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 CDH1P12830 882 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 CCR10P46092 362 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 SLC18A1P54219 525 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 NAA25Q14CX7 972 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 PRAMEF17Q5VTA0 474 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 FBXO42Q6P3S6 717 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 SLCO4C1Q6ZQN7 724 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 PAQR7Q86WK9 346 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 C17orf64Q86WR6 236 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 KDF1Q8NAX2 398 aaPredicted RBP13.79□□□□□ -0.2
CCNL1-217ENST00000476367 ZNF248Q8NDW4 579 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 ZNF740Q8NDX6 193 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 RDH11Q8TC12 318 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 ZNF483Q8TF39 744 aaPredicted RBP13.79□□□□□ -0.2
CCNL1-217ENST00000476367 KCNE4Q8WWG9 221 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 PKNOX2Q96KN3 472 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 PCBD2Q9H0N5 130 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 GSTO2Q9H4Y5 243 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 MLXIPLQ9NP71 852 aa13.79□□□□□ -0.2
CCNL1-217ENST00000476367 URB1O60287 2271 aaKnown RBP13.79□□□□□ -0.2
CCNL1-217ENST00000476367 A0A0J9YVX5 310 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 STMND1H3BQB6 276 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 H7BY64 318 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 UBFD1O14562 309 aaKnown RBP13.78□□□□□ -0.2
CCNL1-217ENST00000476367 TM9SF1O15321 606 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 CCNT2O60583 730 aaKnown RBP13.78□□□□□ -0.2
CCNL1-217ENST00000476367 SMIM24O75264 130 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 SCRG1O75711 98 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 OR2B3O76000 313 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 WFS1O76024 890 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 BPGMP07738 259 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 MSL3P1P0C860 447 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 MYL2P10916 166 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 TSPAN8P19075 237 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 IMPDH1P20839 514 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 CD82P27701 267 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 SERPINB4P48594 390 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 CDH13P55290 713 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 ITGA1P56199 1179 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 DNAJB13P59910 316 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 SNRPNP63162 240 aaKnown RBP13.78□□□□□ -0.2
CCNL1-217ENST00000476367 CSNK1G2P78368 415 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 ABATP80404 500 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 TGIF1Q15583 401 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.78□□□□□ -0.2
CCNL1-217ENST00000476367 LRRC70Q7Z2Q7 622 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 GOLGA7Q7Z5G4 137 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 PLD3Q8IV08 490 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 GPR135Q8IZ08 494 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 DNAJC22Q8N4W6 341 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 OR52B6Q8NGF0 335 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 ZUFSPQ96AP4 578 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 PRAP1Q96NZ9 151 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 PLCD4Q9BRC7 762 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 B3GNT4Q9C0J1 378 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 CHRNA10Q9GZZ6 450 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 STMN4Q9H169 189 aaPredicted RBP13.78□□□□□ -0.2
CCNL1-217ENST00000476367 TNFRSF12AQ9NP84 129 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 DNAJC11Q9NVH1 559 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 ACSL6Q9UKU0 697 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 ZMIZ1Q9ULJ6 1067 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 PLCL2Q9UPR0 1127 aa13.78□□□□□ -0.2
CCNL1-217ENST00000476367 HMGB1P1B2RPK0 211 aaPredicted RBP13.77□□□□□ -0.21
CCNL1-217ENST00000476367 LCMT2O60294 686 aaKnown RBP13.77□□□□□ -0.21
CCNL1-217ENST00000476367 ZWINTO95229 277 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 NTRK1P04629 796 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 LIPCP11150 499 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 NAGLUP54802 743 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 MEF2AQ02078 507 aaPredicted RBP13.77□□□□□ -0.21
CCNL1-217ENST00000476367 CDC16Q13042 620 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 TRAF3Q13114 568 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 PDK4Q16654 411 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 ST3GAL2Q16842 350 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 ZC3H12BQ5HYM0 836 aaKnown RBP13.77□□□□□ -0.21
CCNL1-217ENST00000476367 FRMPD2BQ6IN97 320 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 METTL2BQ6P1Q9 378 aaKnown RBP13.77□□□□□ -0.21
CCNL1-217ENST00000476367 RNF44Q7L0R7 432 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 MCATQ8IVS2 390 aaKnown RBP13.77□□□□□ -0.21
CCNL1-217ENST00000476367 TEX9Q8N6V9 391 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 GALNT6Q8NCL4 622 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 OR8K5Q8NH50 307 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 WDR34Q96EX3 536 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 ZFYVE21Q9BQ24 234 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 SELENOSQ9BQE4 189 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 HAUS8Q9BT25 410 aa13.77□□□□□ -0.21
CCNL1-217ENST00000476367 GATA5Q9BWX5 397 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms