RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 ZNF655Q8N720 491 aaPredicted RBP28.27■■■□□ 2.12
HOXB3-208ENST00000476342 NAF1Q96HR8 494 aaKnown RBP28.27■■■□□ 2.12
HOXB3-208ENST00000476342 AIF1LQ9BQI0 150 aa28.27■■■□□ 2.12
HOXB3-208ENST00000476342 DPH1Q9BZG8 443 aa28.27■■■□□ 2.12
HOXB3-208ENST00000476342 RAXQ9Y2V3 346 aa28.27■■■□□ 2.12
HOXB3-208ENST00000476342 ANGPTL3Q9Y5C1 460 aa28.27■■■□□ 2.12
HOXB3-208ENST00000476342 LOC105369274A0A096LPK9 316 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 LOC102723532A0A0G2JNH3 316 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 H0YGG7 62 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 EIF2S1P05198 315 aaKnown RBP28.26■■■□□ 2.12
HOXB3-208ENST00000476342 CTSBP07858 339 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 EPB42P16452 691 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 EIF2S3P41091 472 aaKnown RBP28.26■■■□□ 2.12
HOXB3-208ENST00000476342 ARF3P61204 181 aaPredicted RBP28.26■■■□□ 2.12
HOXB3-208ENST00000476342 CCDC153Q494R4 210 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 WASHC2DQ5SRD0 308 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 OR4N4Q8N0Y3 316 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 GALNT6Q8NCL4 622 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 RNF31Q96EP0 1072 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 LRFN5Q96NI6 719 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 NDC1Q9BTX1 674 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 SARGQ9BW04 601 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 IQCGQ9H095 443 aaKnown RBP28.26■■■□□ 2.12
HOXB3-208ENST00000476342 EHD1Q9H4M9 534 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 SENP1Q9P0U3 644 aa28.26■■■□□ 2.12
HOXB3-208ENST00000476342 URB1O60287 2271 aaKnown RBP28.26■■■□□ 2.11
HOXB3-208ENST00000476342 KCNE1BA0A087WTH5 132 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 TRBC2A0A5B9 178 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 FEZF1A0PJY2 475 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 TXNDC9O14530 226 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 SBK3P0C264 359 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 CCNYL3P0C7X3 344 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 C1GALT1C1LP0DN25 315 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 CXCR2P25025 360 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 PIK3CGP48736 1102 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 ARSFP54793 590 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 MEF2AQ02078 507 aaPredicted RBP28.26■■■□□ 2.11
HOXB3-208ENST00000476342 YOD1Q5VVQ6 348 aaPredicted RBP28.26■■■□□ 2.11
HOXB3-208ENST00000476342 ATG9BQ674R7 924 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 SLCO4C1Q6ZQN7 724 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 CACNA2D3Q8IZS8 1091 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 IL22RA1Q8N6P7 574 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 TXLNGQ9NUQ3 528 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 MKS1Q9NXB0 559 aa28.26■■■□□ 2.11
HOXB3-208ENST00000476342 CELSR3Q9NYQ7 3312 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 FITM1A5D6W6 292 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 H2AFYO75367 372 aaKnown RBP28.25■■■□□ 2.11
HOXB3-208ENST00000476342 KLK3P07288 261 aaPredicted RBP28.25■■■□□ 2.11
HOXB3-208ENST00000476342 REEP5Q00765 189 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 FAM214AQ32MH5 1076 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 LRRC69Q6ZNQ3 347 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 TIPARPQ7Z3E1 657 aaKnown RBP28.25■■■□□ 2.11
HOXB3-208ENST00000476342 TEX9Q8N6V9 391 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 CSNK1A1LQ8N752 337 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 NKD1Q969G9 470 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 APOPT1Q96IL0 206 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 DCBLD2Q96PD2 775 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 SMC6Q96SB8 1091 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 RUFY1Q96T51 708 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 NLNQ9BYT8 704 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 WDR70Q9NW82 654 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 PCDHGA4Q9Y5G9 962 aa28.25■■■□□ 2.11
HOXB3-208ENST00000476342 DMXL2Q8TDJ6 3036 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 TEX51A0A1B0GUA7 166 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 A8MT66 165 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 TAF4O00268 1085 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 KATNA1O75449 491 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 SIX3O95343 332 aaPredicted RBP28.24■■■□□ 2.11
HOXB3-208ENST00000476342 EEF1DP29692 281 aaKnown RBP28.24■■■□□ 2.11
HOXB3-208ENST00000476342 BCL6P41182 706 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 NFKB2Q00653 900 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 CLN3Q13286 438 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 XKR6Q5GH73 641 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 RHBDD2Q6NTF9 364 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 KRT78Q8N1N4 520 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 MFSD9Q8NBP5 474 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 PTCD3Q96EY7 689 aaKnown RBP28.24■■■□□ 2.11
HOXB3-208ENST00000476342 CENPHQ9H3R5 247 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 STARD5Q9NSY2 213 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 PADI1Q9ULC6 663 aa28.24■■■□□ 2.11
HOXB3-208ENST00000476342 OR1F1O43749 312 aa28.23■■■□□ 2.11
HOXB3-208ENST00000476342 ATP5F1P24539 256 aaPredicted RBP28.23■■■□□ 2.11
HOXB3-208ENST00000476342 VARSP26640 1264 aaKnown RBP28.23■■■□□ 2.11
HOXB3-208ENST00000476342 IRF8Q02556 426 aa28.23■■■□□ 2.11
HOXB3-208ENST00000476342 ABHD18Q0P651 414 aa28.23■■■□□ 2.11
HOXB3-208ENST00000476342 TGIF1Q15583 401 aa28.23■■■□□ 2.11
HOXB3-208ENST00000476342 SLC22A9Q8IVM8 553 aa28.23■■■□□ 2.11
HOXB3-208ENST00000476342 SLC38A9Q8NBW4 561 aa28.23■■■□□ 2.11
HOXB3-208ENST00000476342 PROKR1Q8TCW9 393 aa28.23■■■□□ 2.11
HOXB3-208ENST00000476342 EFCAB11Q9BUY7 163 aa28.23■■■□□ 2.11
HOXB3-208ENST00000476342 PITHD1Q9GZP4 211 aaPredicted RBP28.23■■■□□ 2.11
HOXB3-208ENST00000476342 EMCNQ9ULC0 261 aa28.23■■■□□ 2.11
HOXB3-208ENST00000476342 ZMIZ1Q9ULJ6 1067 aa28.23■■■□□ 2.11
HOXB3-208ENST00000476342 E2F3O00716 465 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 KLK10O43240 276 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 GPS2Q13227 327 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 CHIT1Q13231 466 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 GTF2H2Q13888 395 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 CASP8Q14790 479 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 PRTGQ2VWP7 1150 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms