RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 TAS2R50P59544 299 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 PTK6Q13882 451 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 SEMA3AQ14563 771 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 CDSNQ15517 529 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 MINDY4Q4G0A6 757 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 CCSMST1Q4G0I0 132 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 PAQR7Q86WK9 346 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 SLC5A8Q8N695 610 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 OR9A1PQ8NGU1 263 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 M1APQ8TC57 530 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 AGAP11Q8TF27 550 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 SDCCAG3Q96C92 435 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 POM121Q96HA1 1249 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 FRMD6Q96NE9 622 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 OR2A5Q96R48 311 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 PANX2Q96RD6 677 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 CYTH2Q99418 400 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 EBNA1BP2Q99848 306 aaKnown RBP11.91□□□□□ -0.5
SKA3-206ENST00000475251 TMEM121Q9BTD3 319 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 VN1R1Q9GZP7 353 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 FAM114A2Q9NRY5 505 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 TACC2O95359 2948 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 SOWAHDA6NJG2 315 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 H3BMM5 538 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 CD3EAPO15446 510 aaKnown RBP11.9□□□□□ -0.5
SKA3-206ENST00000475251 NDUFS3O75489 264 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 IPO7O95373 1038 aaKnown RBP11.9□□□□□ -0.5
SKA3-206ENST00000475251 MATN4O95460 622 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 ERGP11308 486 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 STIP1P31948 543 aaKnown RBP11.9□□□□□ -0.5
SKA3-206ENST00000475251 CD96P40200 585 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 GDF10P55107 478 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 ABATP80404 500 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 OC90Q02509 493 aaPredicted RBP11.9□□□□□ -0.5
SKA3-206ENST00000475251 PRDX1Q06830 199 aaKnown RBP11.9□□□□□ -0.5
SKA3-206ENST00000475251 FASTKQ14296 549 aaKnown RBP11.9□□□□□ -0.5
SKA3-206ENST00000475251 SYT16Q17RD7 645 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 ICE2Q659A1 982 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 ZNF425Q6IV72 752 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 ADCK2Q7Z695 626 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 LGI4Q8N135 537 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 TAB3Q8N5C8 712 aaPredicted RBP11.9□□□□□ -0.5
SKA3-206ENST00000475251 SIGLEC12Q96PQ1 595 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 TREX2Q9BQ50 279 aaPredicted RBP11.9□□□□□ -0.5
SKA3-206ENST00000475251 TSPAN10Q9H1Z9 355 aaPredicted RBP11.9□□□□□ -0.5
SKA3-206ENST00000475251 P2RY12Q9H244 342 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 MMP25Q9NPA2 562 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 TAC3Q9UHF0 121 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 PCYOX1Q9UHG3 505 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 PPT2Q9UMR5 302 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 RUVBL2Q9Y230 463 aaKnown RBP11.9□□□□□ -0.5
SKA3-206ENST00000475251 NEU2Q9Y3R4 380 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 ZFHX3Q15911 3703 aa11.9□□□□□ -0.5
SKA3-206ENST00000475251 CACNA1CQ13936 2221 aa11.9□□□□□ -0.51
SKA3-206ENST00000475251 SETD2Q9BYW2 2564 aaPredicted RBP11.89□□□□□ -0.51
SKA3-206ENST00000475251 IGHV3-20A0A0C4DH32 117 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 MYO1CO00159 1063 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 NSA2O95478 260 aaKnown RBP11.89□□□□□ -0.51
SKA3-206ENST00000475251 CATP04040 527 aaKnown RBP11.89□□□□□ -0.51
SKA3-206ENST00000475251 ZNF24P17028 368 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 EIF3BP55884 814 aaKnown RBP11.89□□□□□ -0.51
SKA3-206ENST00000475251 MAT1AQ00266 395 aaKnown RBP11.89□□□□□ -0.51
SKA3-206ENST00000475251 TSTA3Q13630 321 aaPredicted RBP11.89□□□□□ -0.51
SKA3-206ENST00000475251 RNF187Q5TA31 235 aaPredicted RBP11.89□□□□□ -0.51
SKA3-206ENST00000475251 MEI1Q5TIA1 1274 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 FCRLBQ6BAA4 426 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 SPINK14Q6IE38 97 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 SLC25A25Q6KCM7 469 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 AADACL2Q6P093 401 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 SUSD1Q6UWL2 747 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 GALNTL5Q7Z4T8 443 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 LDB1Q86U70 411 aaPredicted RBP11.89□□□□□ -0.51
SKA3-206ENST00000475251 DOLPP1Q86YN1 238 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 CRLF3Q8IUI8 442 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 SIAH3Q8IW03 269 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 ARHGEF39Q8N4T4 335 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 UBL4BQ8N7F7 174 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 SLC35B2Q8TB61 432 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 ALG3Q92685 438 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 ZNF778Q96MU6 729 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 DMRTA2Q96SC8 542 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 LPAR4Q99677 370 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 TRIM51Q9BSJ1 452 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 ETNK1Q9HBU6 452 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 SLC24A3Q9HC58 644 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 ANKRD10Q9NXR5 420 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 LRFN1Q9P244 771 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 TFR2Q9UP52 801 aa11.89□□□□□ -0.51
SKA3-206ENST00000475251 PCNX1Q96RV3 2341 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 IGKV1-8A0A0C4DH67 115 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 A0A0U1RQJ8 604 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 KRT87PA6NCN2 255 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 GABRR3A8MPY1 467 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 AP3B1O00203 1094 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 KIF5CO60282 957 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 WISP2O76076 250 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 SP1P08047 785 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 IL10P22301 178 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 HRH2P25021 359 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 XCR1P46094 333 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms