RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 OR4F6Q8NGB9 312 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 CCDC120Q96HB5 630 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 NUSAP1Q9BXS6 441 aaKnown RBP10.67□□□□□ -0.7
VAPB-204ENST00000475243 TDP1Q9NUW8 608 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 KCTD3Q9Y597 815 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 PRORSD1PA6NEY8 169 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 CDC123O75794 336 aaPredicted RBP10.67□□□□□ -0.7
VAPB-204ENST00000475243 KLHL36Q8N4N3 616 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 AQP11Q8NBQ7 271 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 CAMKVQ8NCB2 501 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 OR2AP1Q8NGE2 309 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 CANT1Q8WVQ1 401 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 TFGQ92734 400 aaPredicted RBP10.67□□□□□ -0.7
VAPB-204ENST00000475243 OR51B5Q9H339 312 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 A0A0D9SEW6 157 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 MATN1P21941 496 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 NPTX1Q15818 432 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 SDR16C5Q8N3Y7 309 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 SH3YL1Q96HL8 342 aaPredicted RBP10.67□□□□□ -0.7
VAPB-204ENST00000475243 SCML2Q9UQR0 700 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 PLEKHA6Q9Y2H5 1048 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 ILVBLA1L0T0 632 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 A8MT66 165 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 PDCD5O14737 125 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 INPPL1O15357 1258 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 TACSTD2P09758 323 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 AP1S2P56377 157 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 GPR33Q49SQ1 333 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 GOLGA7Q7Z5G4 137 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 TRIM74Q86UV6 250 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 GPALPP1Q8IXQ4 340 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 MTMR14Q8NCE2 650 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 TLCD1Q96CP7 247 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 CMTM7Q96FZ5 175 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 BTBD1Q9H0C5 482 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 TLR9Q9NR96 1032 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 RNF11Q9Y3C5 154 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 AKAP8O43823 692 aaKnown RBP10.67□□□□□ -0.7
VAPB-204ENST00000475243 PRKD3O94806 890 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 H6PDO95479 791 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 MERTKQ12866 999 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 ACSBG2Q5FVE4 666 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 COLEC12Q5KU26 742 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 SPERTQ8NA61 448 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 OR4K17Q8NGC6 315 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 TM9SF2Q99805 663 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 CDC14AQ9UNH5 594 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 ASB3Q9Y575 518 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 TRIM64A6NGJ6 449 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 HMGB3O15347 200 aaKnown RBP10.67□□□□□ -0.7
VAPB-204ENST00000475243 FGF18O76093 207 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 PREPP48147 710 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 LAPTM4AQ15012 233 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 CNKSR3Q6P9H4 555 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 PNLDC1Q8NA58 520 aaKnown RBP10.67□□□□□ -0.7
VAPB-204ENST00000475243 KLHL6Q8WZ60 621 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 KAT8Q9H7Z6 458 aaKnown RBP10.67□□□□□ -0.7
VAPB-204ENST00000475243 METTL7AQ9H8H3 244 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 RHCGQ9UBD6 479 aa10.67□□□□□ -0.7
VAPB-204ENST00000475243 EDDM13A0A1B0GTR0 161 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 BRAT1Q6PJG6 821 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 JAGN1Q8N5M9 183 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 DCAKDQ8WVC6 231 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 C10orf82Q8WW14 230 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 JPH3Q8WXH2 748 aaPredicted RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 TMEM74Q96NL1 305 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 ANKRA2Q9H9E1 313 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 GNG8Q9UK08 70 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 CLDN25C9JDP6 229 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 DNAJA1P31689 397 aaKnown RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 HSD17B2P37059 387 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 HCAR3P49019 387 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 MLLT10P55197 1068 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 CDH15P55291 814 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 MEF2AQ02078 507 aaPredicted RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 NOXRED1Q6NXP6 359 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 ZDHHC24Q6UX98 284 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 SLC30A8Q8IWU4 369 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 CMASQ8NFW8 434 aaPredicted RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 WDR77Q9BQA1 342 aaPredicted RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 TAS2R1Q9NYW7 299 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 RPL36Q9Y3U8 105 aaKnown RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 VIRMAQ69YN4 1812 aaKnown RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 E7EQ34 232 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 NPIPA5E9PKD4 350 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 ORC5O43913 435 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 APOC1P02654 83 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 ZNF648Q5T619 568 aaPredicted RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 HERC2P3Q9BVR0 1158 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 ITM2CQ9NQX7 267 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 SDHAF3Q9NRP4 125 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 NPIPA1Q9UND3 350 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 PEX16Q9Y5Y5 336 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 KLK3P07288 261 aaPredicted RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 H1F0P07305 194 aaKnown RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 SLC35F1Q5T1Q4 408 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 MSANTD1Q6ZTZ1 278 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 GPR88Q9GZN0 384 aa10.66□□□□□ -0.7
VAPB-204ENST00000475243 FAM124BQ9H5Z6 455 aaPredicted RBP10.66□□□□□ -0.7
VAPB-204ENST00000475243 VNN3Q9NY84 501 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms