RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 IGFLR1Q9H665 355 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 FBRSQ9HAH7 460 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 CD320Q9NPF0 282 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 NDUFA13Q9P0J0 144 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 CLEC1BQ9P126 229 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 SLC23A2Q9UGH3 650 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 SERGEFQ9UGK8 458 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 ADGRE2Q9UHX3 823 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 ZFR2Q9UPR6 939 aaKnown RBP9.46□□□□□ -0.9
USP39-214ENST00000474572 EXO1Q9UQ84 846 aaKnown RBP9.46□□□□□ -0.9
USP39-214ENST00000474572 ERVK-11Q9UQG0 969 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 BTBD3Q9Y2F9 522 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 AP1M2Q9Y6Q5 423 aa9.46□□□□□ -0.9
USP39-214ENST00000474572 SMIM31A0A1B0GVY4 71 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 C1orf226A1L170 272 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 H3BNH8 94 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 K7EQS6 105 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 PDLIM1O00151 329 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 PLOD2O00469 737 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 EI24O14681 340 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 FPGTO14772 594 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 GSTA4O15217 222 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 YY2O15391 372 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 PLRG1O43660 514 aaKnown RBP9.45□□□□□ -0.9
USP39-214ENST00000474572 GMNNO75496 209 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 LRATO95237 230 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 B3GALT4O96024 378 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 SEMG1P04279 462 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 RPN2P04844 631 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 PCCBP05166 539 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 ABCB1P08183 1280 aaPredicted RBP9.45□□□□□ -0.9
USP39-214ENST00000474572 PCNAP12004 261 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 COX7A2P14406 83 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 IDSP22304 550 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 HSD17B2P37059 387 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 MAGEA2P43356 314 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 ADARB1P78563 741 aaKnown RBP9.45□□□□□ -0.9
USP39-214ENST00000474572 SLC14A1Q13336 389 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 FGL2Q14314 439 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 STARD3Q14849 445 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 ADRM1Q16186 407 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 CYP2A13Q16696 494 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 PGS1Q32NB8 556 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 TMEM259Q4ZIN3 620 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 ATAT1Q5SQI0 421 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 KIAA1161Q6NSJ0 714 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 ERICH5Q6P6B1 374 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 ENPP6Q6UWR7 440 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 USP51Q70EK9 711 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 ARMCX6Q7L4S7 300 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 ZZZ3Q8IYH5 903 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 EID3Q8N140 333 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 HDDC3Q8N4P3 179 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 FAM86B1Q8N7N1 296 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 ZNF513Q8N8E2 541 aaPredicted RBP9.45□□□□□ -0.9
USP39-214ENST00000474572 OR7A2PQ8NGA2 310 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 OR5K2Q8NHB8 316 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 FIG4Q92562 907 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 TFGQ92734 400 aaPredicted RBP9.45□□□□□ -0.9
USP39-214ENST00000474572 MTERF3Q96E29 417 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 SLC47A1Q96FL8 570 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 AURKBQ96GD4 344 aaPredicted RBP9.45□□□□□ -0.9
USP39-214ENST00000474572 RNF145Q96MT1 663 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 RDH12Q96NR8 316 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 SEPHS2Q99611 448 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 TIMM29Q9BSF4 260 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 HAUS8Q9BT25 410 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 DUSP26Q9BV47 211 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 TRMT61BQ9BVS5 477 aaKnown RBP9.45□□□□□ -0.9
USP39-214ENST00000474572 LGR4Q9BXB1 951 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 C1QTNF2Q9BXJ5 285 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 BHLHE41Q9C0J9 482 aaPredicted RBP9.45□□□□□ -0.9
USP39-214ENST00000474572 CHST8Q9H2A9 424 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 SPNS1Q9H2V7 528 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 NT5DC2Q9H857 520 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 RMI1Q9H9A7 625 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 PELI2Q9HAT8 420 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 MYNNQ9NPC7 610 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 ZDHHC4Q9NPG8 344 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 WASH6PQ9NQA3 447 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 MBNL1Q9NR56 388 aaKnown RBP9.45□□□□□ -0.9
USP39-214ENST00000474572 USE1Q9NZ43 259 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 CIDEBQ9UHD4 219 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 ASF1AQ9Y294 204 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 TMEM98Q9Y2Y6 226 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 PCDHB11Q9Y5F2 797 aa9.45□□□□□ -0.9
USP39-214ENST00000474572 PRRC2BQ5JSZ5 2229 aaKnown RBP9.45□□□□□ -0.9
USP39-214ENST00000474572 GABRR3A8MPY1 467 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 EVPLLA8MZ36 301 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 H0YAE9 185 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 RFXAPO00287 272 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 CLIC1O00299 241 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 RNASET2O00584 256 aaKnown RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 PCDH7O60245 1069 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 TBX19O60806 448 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 KCNJ13O60928 360 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 KLHL18O94889 574 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 SEMA3DO95025 777 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 EPN2O95208 641 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 CCNDBP1O95273 360 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms