RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 H7BY64 318 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 HAT1O14929 419 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 SLC16A5O15375 505 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 HEXBP07686 556 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 TCP1P17987 556 aaKnown RBP19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 CCND1P24385 295 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 TSFMP43897 325 aaKnown RBP19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 AVPR1BP47901 424 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 RPS15AP62244 130 aaKnown RBP19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 AP2B1P63010 937 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 DHX9Q08211 1270 aaKnown RBP19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 Q0VFX4 171 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 MFAP5Q13361 173 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 ZNF169Q14929 603 aaPredicted RBP19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 TLR1Q15399 786 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 GALNT7Q86SF2 657 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 LAPTM4BQ86VI4 370 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 CNTN4Q8IWV2 1026 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 MYO1HQ8N1T3 1032 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 ARHGEF39Q8N4T4 335 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 AMER3Q8N944 861 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 C8orf44Q96CB5 159 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 PRAP1Q96NZ9 151 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 FAM129AQ9BZQ8 928 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 SYNPO2LQ9H987 977 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 RIC8BQ9NVN3 520 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 KCNE1BA0A087WTH5 132 aa19.33■□□□□ 0.68
PDLIM4-206ENST00000474421 A0A0A6YYC8 382 aaPredicted RBP19.33■□□□□ 0.68
PDLIM4-206ENST00000474421 I3L1I5 382 aaPredicted RBP19.33■□□□□ 0.68
PDLIM4-206ENST00000474421 FOXS1O43638 330 aa19.33■□□□□ 0.68
PDLIM4-206ENST00000474421 COX6A1P12074 109 aa19.33■□□□□ 0.68
PDLIM4-206ENST00000474421 TBPL1P62380 186 aa19.33■□□□□ 0.68
PDLIM4-206ENST00000474421 EEF1AKMT1Q8WVE0 214 aa19.33■□□□□ 0.68
PDLIM4-206ENST00000474421 CNDP1Q96KN2 507 aa19.33■□□□□ 0.68
PDLIM4-206ENST00000474421 NDNQ99608 321 aa19.33■□□□□ 0.68
PDLIM4-206ENST00000474421 DDX47Q9H0S4 455 aaKnown RBP19.33■□□□□ 0.68
PDLIM4-206ENST00000474421 PLEKHB1Q9UF11 243 aaPredicted RBP19.33■□□□□ 0.68
PDLIM4-206ENST00000474421 PABPN1LA6NDY0 278 aaKnown RBP19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 H0YIG0 161 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 P2RX6O15547 441 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 SERPINA7P05543 415 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 CYC1P08574 325 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 HIST1H2AGP0C0S8 130 aaPredicted RBP19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 ICAM2P13598 275 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 HIST1H2ADP20671 130 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 CDC16Q13042 620 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 LINC00696Q6ZRV3 163 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 RIPOR1Q6ZS17 1223 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 SYDE1Q6ZW31 735 aaPredicted RBP19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 C17orf64Q86WR6 236 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 PLD3Q8IV08 490 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 PDIK1LQ8N165 341 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 CERS2Q96G23 380 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 HIST1H2AHQ96KK5 128 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 RUNDC3BQ96NL0 473 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 HIST1H2AJQ99878 128 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 H2AFJQ9BTM1 129 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 CORO1CQ9ULV4 474 aaPredicted RBP19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 PDE10AQ9Y233 779 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 CSAG2Q9Y5P2 127 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 POLEQ07864 2286 aa19.32■□□□□ 0.68
PDLIM4-206ENST00000474421 IGHV1-45A0A0A0MS14 117 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 DYTNA2CJ06 578 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 BMP10O95393 424 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 PRR35P0CG20 571 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 GRK3P35626 688 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 TIAL1Q01085 375 aaKnown RBP eCLIP19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 MORF4L2Q15014 288 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 BBS9Q3SYG4 887 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 C4orf17Q53FE4 359 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 AGTRAPQ6RW13 159 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 PAQR3Q6TCH7 311 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 CAMKVQ8NCB2 501 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 ST6GALNAC3Q8NDV1 305 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 MESP1Q9BRJ9 268 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 PPANQ9NQ55 473 aaKnown RBP19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 TRMT1Q9NXH9 659 aaKnown RBP19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 ADAMTS6Q9UKP5 1117 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 SLC5A6Q9Y289 635 aa19.31■□□□□ 0.68
PDLIM4-206ENST00000474421 LOC102723996A0A087X1L8 192 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 FFAR3O14843 346 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 GPR42O15529 346 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 KLHL18O94889 574 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 NSA2O95478 260 aaKnown RBP19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 AHSGP02765 367 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 GABRB3P28472 473 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 CDKN2DP55273 166 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 IL2P60568 153 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 EEF1A2Q05639 463 aaKnown RBP19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 PDAP1Q13442 181 aaKnown RBP19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 MSS51Q4VC12 460 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 CAPN13Q6MZZ7 669 aaPredicted RBP19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 RPUSD3Q6P087 351 aaKnown RBP19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 TMEM205Q6UW68 189 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 SPNS2Q8IVW8 549 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 ZC3H7AQ8IWR0 971 aaKnown RBP19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 METTL21AQ8WXB1 218 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 LRRC39Q96DD0 335 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 LINGO1Q96FE5 620 aa19.3■□□□□ 0.68
PDLIM4-206ENST00000474421 HAUS8Q9BT25 410 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms