RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 EIF3MQ7L2H7 374 aaKnown RBP18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 TRIM46Q7Z4K8 759 aa18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 PLCZ1Q86YW0 608 aa18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 ZZZ3Q8IYH5 903 aa18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 ZNF683Q8IZ20 524 aa18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 PGBD3Q8N328 593 aa18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 VANGL1Q8TAA9 524 aaPredicted RBP18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 SMIM14Q96QK8 99 aa18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 FEVQ99581 238 aa18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 CNPPD1Q9BV87 410 aa18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 TTLL2Q9BWV7 592 aa18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 RNF121Q9H920 327 aa18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 TMLHEQ9NVH6 421 aa18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 MAT2BQ9NZL9 334 aa18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 FNDC3AQ9Y2H6 1198 aaKnown RBP18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 CFAP20Q9Y6A4 193 aaKnown RBP18.03■□□□□ 0.48
ECHDC1-214ENST00000474289 RFXANKO14593 260 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 FFAR2O15552 330 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 SLC10A3P09131 477 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 CCNYL3P0C7X3 344 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 UQCRC1P31930 480 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 GDF5P43026 501 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 PXNP49023 591 aaPredicted RBP18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 AP2S1P53680 142 aaPredicted RBP18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 RPS14P62263 151 aaKnown RBP18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 SNRPD2P62316 118 aaKnown RBP18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 PSPHP78330 225 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 HOXC5Q00444 222 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 PCBP1Q15365 356 aaKnown RBP eCLIP18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 PTCHD3Q3KNS1 767 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 C5orf22Q49AR2 442 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 CCDC149Q6ZUS6 474 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 GLT6D1Q7Z4J2 308 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 SCD5Q86SK9 330 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 CARNMT1Q8N4J0 409 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 KCNJ9Q92806 393 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 REPS1Q96D71 796 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 TPD52L3Q96J77 140 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 EXOSC4Q9NPD3 245 aaKnown RBP18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 DIABLOQ9NR28 239 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 ELOVL2Q9NXB9 296 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 MS4A12Q9NXJ0 267 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 TMPRSS11EQ9UL52 423 aa18.02■□□□□ 0.48
ECHDC1-214ENST00000474289 ARHGEF9O43307 516 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 NOS1APO75052 506 aaPredicted RBP18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 KCNK5O95279 499 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 SNAI1O95863 264 aaPredicted RBP18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 SMIM10L2AP0DMW4 78 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 SMIM10L2BP0DMW5 78 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 COL6A1P12109 1028 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 PCSK1P29120 753 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 TGM4P49221 684 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 CSTF3Q12996 717 aaKnown RBP18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 TNK1Q13470 666 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 ESCO2Q56NI9 601 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 CHCHD4Q8N4Q1 142 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 MDGA1Q8NFP4 955 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 OR6J1Q8NGC5 347 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 C7orf34Q96L11 122 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 TRIB3Q96RU7 358 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 CCM2Q9BSQ5 444 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 TAPBPLQ9BX59 468 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 NMUR1Q9HB89 426 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 TMEM39AQ9NV64 488 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 PPT2Q9UMR5 302 aa18.02■□□□□ 0.47
ECHDC1-214ENST00000474289 TAPBPO15533 448 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 TSPAN3O60637 253 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 CYP2A6P11509 494 aaPredicted RBP18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 POLR2CP19387 275 aaPredicted RBP18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 ARPP19P56211 112 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 DMC1Q14565 340 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 ZNF235Q14590 738 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 SLC35F1Q5T1Q4 408 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 ZNF648Q5T619 568 aaPredicted RBP18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 KRT73Q86Y46 540 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 UBE2J2Q8N2K1 259 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 GALNT6Q8NCL4 622 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 OR10T2Q8NGX3 314 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 WDFY2Q96P53 400 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 TSSK3Q96PN8 268 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 DPH2Q9BQC3 489 aaPredicted RBP18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 SLC6A14Q9UN76 642 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 LTBP3Q9NS15 1303 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 SLC35F4A4IF30 521 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 LEUTXA8MZ59 168 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 GPR182O15218 404 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 CD9P21926 228 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 KCNQ1P51787 676 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 CLDN8P56748 225 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 IL10RBQ08334 325 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 SMARCB1Q12824 385 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 BTBD16Q32M84 506 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 PTOV1Q86YD1 416 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 DENND6BQ8NEG7 585 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 C9orf43Q8TAL5 461 aaPredicted RBP18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 UTP15Q8TED0 518 aaKnown RBP18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 MTFMTQ96DP5 389 aaKnown RBP18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 ITM2BQ9Y287 266 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 VPS9D1Q9Y2B5 631 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 PCDHGA2Q9Y5H1 932 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms