RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 DPH5Q9H2P9 285 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 SAYSD1Q9NPB0 183 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 TRPC4Q9UBN4 977 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 CTSFQ9UBX1 484 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 ADAMTS6Q9UKP5 1117 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 TLN1Q9Y490 2541 aaKnown RBP19.5■□□□□ 0.71
SNX13-206ENST00000474067 RAD51CO43502 376 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 VPS4BO75351 444 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 TUBB4AP04350 444 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 ACPPP15309 386 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 SAT1P21673 171 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 CDKL1Q00532 357 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 TIAL1Q01085 375 aaKnown RBP eCLIP19.49■□□□□ 0.71
SNX13-206ENST00000474067 METTL27Q8N6F8 245 aaPredicted RBP19.49■□□□□ 0.71
SNX13-206ENST00000474067 OR56A3Q8NH54 315 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 PNPLA2Q96AD5 504 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 PWWP2AQ96N64 755 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 CPNE1Q99829 537 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 SLC29A3Q9BZD2 475 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 EPS8L2Q9H6S3 715 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 GPAMQ9HCL2 828 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 C3orf18Q9UK00 162 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 FBXL4Q9UKA2 621 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 VPS4AQ9UN37 437 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 DYRK1BQ9Y463 629 aa19.49■□□□□ 0.71
SNX13-206ENST00000474067 FER1L5A0AVI2 2057 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 URADA6NGE7 173 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 CNOT3O75175 753 aaKnown RBP19.48■□□□□ 0.71
SNX13-206ENST00000474067 NSA2O95478 260 aaKnown RBP19.48■□□□□ 0.71
SNX13-206ENST00000474067 TSPAN12O95859 305 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 HPP00738 406 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 IL10P22301 178 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 STX2P32856 288 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 SLC26A3P40879 764 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 KLC1Q07866 573 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 C2orf54Q08AI8 447 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 CSHL1Q14406 222 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 PHKG1Q16816 387 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 HKDC1Q2TB90 917 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 AGAP7PQ5VUJ5 663 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 IGFL3Q6UXB1 125 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 ZNF572Q7Z3I7 529 aaPredicted RBP19.48■□□□□ 0.71
SNX13-206ENST00000474067 METTL21AQ8WXB1 218 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 AGAP4Q96P64 663 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 EGFL8Q99944 293 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 LHPPQ9H008 270 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 PLAC1Q9HBJ0 212 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 ANKHQ9HCJ1 492 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 CUEDC1Q9NWM3 386 aaPredicted RBP19.48■□□□□ 0.71
SNX13-206ENST00000474067 CTNNAL1Q9UBT7 734 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 HS3ST3B1Q9Y662 390 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 KCNE2Q9Y6J6 123 aa19.48■□□□□ 0.71
SNX13-206ENST00000474067 K7EM74 188 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 HEXBP07686 556 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 ICAM2P13598 275 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 HPDP32754 393 aaPredicted RBP19.47■□□□□ 0.71
SNX13-206ENST00000474067 GP5P40197 560 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 EMP2P54851 167 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 YBX1P67809 324 aaKnown RBP19.47■□□□□ 0.71
SNX13-206ENST00000474067 CSNK1G2P78368 415 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 NAB1Q13506 487 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 FASTKD3Q14CZ7 662 aaKnown RBP19.47■□□□□ 0.71
SNX13-206ENST00000474067 C8orf74Q6P047 294 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 C3orf62Q6ZUJ4 267 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 ASPGQ86U10 573 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 IQCKQ8N0W5 287 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 TCAIMQ8N3R3 496 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 ABHD11Q8NFV4 315 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.47■□□□□ 0.71
SNX13-206ENST00000474067 OLFM1Q99784 485 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 WDR83Q9BRX9 315 aaKnown RBP19.47■□□□□ 0.71
SNX13-206ENST00000474067 SARGQ9BW04 601 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 CAPS2Q9BXY5 557 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 TSPYL1Q9H0U9 437 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 RIC8BQ9NVN3 520 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 C19orf25Q9UFG5 118 aaPredicted RBP19.47■□□□□ 0.71
SNX13-206ENST00000474067 OARD1Q9Y530 152 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 HEATR5BQ9P2D3 2071 aa19.47■□□□□ 0.71
SNX13-206ENST00000474067 NSG1A0A0A6YYJ2 146 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 SOCS6O14544 535 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 TP73O15350 636 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 NRP2O60462 931 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 GUCA1CO95843 209 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 PDGFAP04085 211 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 CDH1P12830 882 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 NPPBP16860 134 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 STMN1P16949 149 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 SPRP35270 261 aaPredicted RBP19.46■□□□□ 0.71
SNX13-206ENST00000474067 CD97P48960 835 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 RGS1Q08116 209 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 HERC3Q15034 1050 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 JMJD6Q6NYC1 403 aaPredicted RBP19.46■□□□□ 0.71
SNX13-206ENST00000474067 CPT1CQ8TCG5 803 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 SLC13A3Q8WWT9 602 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 CNOT10Q9H9A5 744 aaKnown RBP19.46■□□□□ 0.71
SNX13-206ENST00000474067 SLC17A6Q9P2U8 582 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 B3GNT3Q9Y2A9 372 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 SLC22A7Q9Y694 548 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 ANKRD12Q6UB98 2062 aa19.46■□□□□ 0.71
SNX13-206ENST00000474067 CFAP46Q8IYW2 2715 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms