RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CARFQ8N187 725 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 EMC1Q8N766 993 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 FAM156AQ8NDB6 213 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 CHDHQ8NE62 594 aaPredicted RBP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 NANPQ8TBE9 248 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC5A11Q8WWX8 675 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 NSMAFQ92636 917 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 KAT5Q92993 513 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 NEDD4LQ96PU5 975 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 TCEAL7Q9BRU2 100 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 WDR83Q9BRX9 315 aaKnown RBP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 COPS4Q9BT78 406 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 MED18Q9BUE0 208 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PTDSS2Q9BVG9 487 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 C1QTNF1Q9BXJ1 281 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 FRMD8P1Q9BZ68 369 aaPredicted RBP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 ZYG11BQ9C0D3 744 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PPIL3Q9H2H8 161 aaKnown RBP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 MUC13Q9H3R2 512 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PIGUQ9H490 435 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 C11orf49Q9H6J7 331 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 KLHL1Q9NR64 748 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 SPATA6Q9NWH7 488 aaPredicted RBP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 USE1Q9NZ43 259 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PURGQ9UJV8 347 aaKnown RBP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 NUDT5Q9UKK9 219 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PIPSLA2A3N6 862 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 FITM1A5D6W6 292 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 EFCAB7A8K855 629 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 K7ENM7 598 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 MSTNO14793 375 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PLIN3O60664 434 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 BANF1O75531 89 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 SUPT7LO94864 414 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 TNNC2P02585 160 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 ACSM4P0C7M7 580 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 CTPS1P17812 591 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 RPS3P23396 243 aaKnown RBP eCLIP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 POU1F1P28069 291 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 CTNNB1P35222 781 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 RFC2P35250 354 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 GPR3P46089 330 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 VEGFCP49767 419 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 LSM3P62310 102 aaKnown RBP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 HERVK_113P63132 956 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PLIN5Q00G26 463 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 EMX1Q04741 257 aaPredicted RBP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 STX4Q12846 297 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 BMPR2Q13873 1038 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 TMEM132BQ14DG7 1078 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 TRAM2Q15035 370 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PPA1Q15181 289 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PUM3Q15397 648 aaKnown RBP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 NR0B2Q15466 257 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC9B1Q4ZJI4 515 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PRSS36Q5K4E3 855 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 TMEM240Q5SV17 173 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 LRRC8EQ6NSJ5 796 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PLBD1Q6P4A8 553 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 LMBR1LQ6UX01 489 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 TRILQ7L0X0 811 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PLD5Q8N7P1 536 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 AGBL3Q8NEM8 1001 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 ELP5Q8TE02 316 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC20A1Q8WUM9 679 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 HDAC10Q969S8 669 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 MYLPFQ96A32 169 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 REPS1Q96D71 796 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 ZNF668Q96K58 619 aaPredicted RBP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 RNF145Q96MT1 663 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 LINC00052Q96N35 136 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PDCD10Q9BUL8 212 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 BEX2Q9BXY8 128 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 ALX4Q9H161 411 aaPredicted RBP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 ZCCHC4Q9H5U6 513 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 EQTNQ9NQ60 294 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 THUMPD1Q9NXG2 353 aaKnown RBP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 CYTH4Q9UIA0 394 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 INTS6Q9UL03 887 aaKnown RBP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 NIP7Q9Y221 180 aaKnown RBP eCLIP4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC22A23A1A5C7 686 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PRORSD1PA6NEY8 169 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 TARM1B6A8C7 271 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 DNASE2O00115 360 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 KIAA0355O15063 1070 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 CRTAPO75718 401 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 AKAP3O75969 853 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PAPSS2O95340 614 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 LDLRP01130 860 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 RB1P06400 928 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 ADRB1P08588 477 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 ZSCAN5DPP0CG00 497 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 RNF224P0DH78 156 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 HLA-EP13747 358 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 RAB4AP20338 218 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 FGFR2P21802 821 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 PRKCHP24723 683 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SDHAP31040 664 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 SOX6P35712 828 aa4.97□□□□□ -1.61
TMEM39A-206ENST00000473684 ALDH9A1P49189 494 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms