RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 PTPRRQ15256 657 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 RABEP1Q15276 862 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 CA9Q16790 459 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 HSP90AB3PQ58FF7 597 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ALG10Q5BKT4 473 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ALG10BQ5I7T1 473 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 C9orf50Q5SZB4 431 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 PRAMEF20Q5VT98 475 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ZNF770Q6IQ21 691 aaPredicted RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 NEK5Q6P3R8 708 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ENPP7Q6UWV6 458 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ANKRD33Q7Z3H0 272 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 POLNQ7Z5Q5 900 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 RTN4RL2Q86UN3 420 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ADAD2Q8NCV1 583 aaKnown RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 OR56B1Q8NGI3 324 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 OR10Q1Q8NGQ4 319 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 OR52I2Q8NH67 350 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 SLAMF9Q96A28 289 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 PYCR2Q96C36 320 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 CCDC17Q96LX7 622 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 NSMCE2Q96MF7 247 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 PSKH2Q96QS6 385 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 SLC22A12Q96S37 553 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 NDNQ99608 321 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ZNF416Q9BWM5 594 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 GLRX2Q9NS18 164 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ATAD3AQ9NVI7 634 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 TMEM161AQ9NX61 479 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 B3GAT1Q9P2W7 334 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 SH2B3Q9UQQ2 575 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ENTPD4Q9Y227 616 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.52□□□□□ -2.019e-8■□□□□ 9.5
XRN1-210ENST00000472697 SPIN1Q9Y657 262 aaPredicted RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 SSH2Q76I76 1423 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 YTHDC2Q9H6S0 1430 aaKnown RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 ZNF644Q9H582 1327 aaPredicted RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 KRTAP23-1A1A580 65 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 LRRC3CA6NJW4 275 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 OVOL3O00110 214 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 INPPL1O15357 1258 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ATP6V1G1O75348 118 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 TOM1L1O75674 476 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 NXPH3O95157 252 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 WDPCPO95876 746 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 IGHV2-70P01814 119 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 CEACAM1P13688 526 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 UBA1P22314 1058 aaKnown RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 UQCRC2P22695 453 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 MARCKSP29966 332 aaPredicted RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 SSTR2P30874 369 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 SRD5A2P31213 254 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 CA8P35219 290 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 SOAT1P35610 550 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ZXDBP98169 803 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ABRQ12979 859 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 SLC15A2Q16348 729 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 DUOXA1Q1HG43 343 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 C18orf63Q68DL7 685 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ZNF782Q6ZMW2 699 aaPredicted RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 IL17RELQ6ZVW7 336 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 SYVN1Q86TM6 617 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 GPR180Q86V85 440 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 C1orf210Q8IVY1 113 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ZNF679Q8IYX0 411 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ZCCHC7Q8N3Z6 543 aaKnown RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 FGFBP3Q8TAT2 258 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 FAM216AQ8WUB2 273 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 SSMEM1Q8WWF3 244 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ARSGQ96EG1 525 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 DAZAP1Q96EP5 407 aaKnown RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 P2RY11Q96G91 374 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 CDKN2AIPNLQ96HQ2 116 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 RASL10BQ96S79 203 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 TBC1D10AQ9BXI6 508 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 DDX47Q9H0S4 455 aaKnown RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 FOXP1Q9H334 677 aaPredicted RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 PIH1D3Q9NQM4 214 aaKnown RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 CNGB3Q9NQW8 809 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 FAM118AQ9NWS6 357 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 VPS18Q9P253 973 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 WDR37Q9Y2I8 494 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 WNT6Q9Y6F9 365 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ROCK1Q13464 1354 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 RGPD8O14715 1765 aaPredicted RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 A0A087X0K7 114 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 TEX13DA0A0J9YY54 714 aaPredicted RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 OR2M5A3KFT3 312 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 SLC15A5A6NIM6 579 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 ANKRD66B4E2M5 251 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 PSMD3O43242 534 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 PGLSO95336 258 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 SERPINA3P01011 423 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 LIPFP07098 398 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 MED14OSP0DP75 135 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 HSPA8P11142 646 aaKnown RBP2.51□□□□□ -2.01
XRN1-210ENST00000472697 CETPP11597 493 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 SFTPCP11686 197 aa2.51□□□□□ -2.01
XRN1-210ENST00000472697 F3P13726 295 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms