RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TUBA3CQ13748 450 aa8.81□□□□□ -1
VCL-204ENST00000472585 TRIM14Q14142 442 aa8.81□□□□□ -1
VCL-204ENST00000472585 LAPTM4AQ15012 233 aa8.81□□□□□ -1
VCL-204ENST00000472585 CEBPEQ15744 281 aa8.81□□□□□ -1
VCL-204ENST00000472585 KCTD19Q17RG1 926 aaPredicted RBP8.81□□□□□ -1
VCL-204ENST00000472585 MUM1Q2TAK8 710 aa8.81□□□□□ -1
VCL-204ENST00000472585 ZNF766Q5HY98 468 aa8.81□□□□□ -1
VCL-204ENST00000472585 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.81□□□□□ -1
VCL-204ENST00000472585 CTSL3PQ5NE16 218 aa8.81□□□□□ -1
VCL-204ENST00000472585 ZNF468Q5VIY5 522 aaPredicted RBP8.81□□□□□ -1
VCL-204ENST00000472585 ABHD17BQ5VST6 288 aa8.81□□□□□ -1
VCL-204ENST00000472585 TUBA3EQ6PEY2 450 aa8.81□□□□□ -1
VCL-204ENST00000472585 C3P1Q6ZMU1 363 aa8.81□□□□□ -1
VCL-204ENST00000472585 PRSS41Q7RTY9 318 aa8.81□□□□□ -1
VCL-204ENST00000472585 PAQR7Q86WK9 346 aa8.81□□□□□ -1
VCL-204ENST00000472585 DOLPP1Q86YN1 238 aa8.81□□□□□ -1
VCL-204ENST00000472585 BEST3Q8N1M1 668 aa8.81□□□□□ -1
VCL-204ENST00000472585 TC2NQ8N9U0 490 aa8.81□□□□□ -1
VCL-204ENST00000472585 AGAP11Q8TF27 550 aa8.81□□□□□ -1
VCL-204ENST00000472585 THAP3Q8WTV1 239 aaPredicted RBP8.81□□□□□ -1
VCL-204ENST00000472585 PHF10Q8WUB8 498 aaKnown RBP8.81□□□□□ -1
VCL-204ENST00000472585 NINJ1Q92982 152 aa8.81□□□□□ -1
VCL-204ENST00000472585 RAD51AP1Q96B01 352 aa8.81□□□□□ -1
VCL-204ENST00000472585 MMABQ96EY8 250 aaPredicted RBP8.81□□□□□ -1
VCL-204ENST00000472585 CABS1Q96KC9 395 aa8.81□□□□□ -1
VCL-204ENST00000472585 GPR137Q96N19 417 aa8.81□□□□□ -1
VCL-204ENST00000472585 ZFYVE21Q9BQ24 234 aa8.81□□□□□ -1
VCL-204ENST00000472585 PLCD4Q9BRC7 762 aa8.81□□□□□ -1
VCL-204ENST00000472585 TRIM51Q9BSJ1 452 aa8.81□□□□□ -1
VCL-204ENST00000472585 YIPF2Q9BWQ6 316 aa8.81□□□□□ -1
VCL-204ENST00000472585 VN1R1Q9GZP7 353 aa8.81□□□□□ -1
VCL-204ENST00000472585 ETNK1Q9HBU6 452 aa8.81□□□□□ -1
VCL-204ENST00000472585 ANKRD10Q9NXR5 420 aa8.81□□□□□ -1
VCL-204ENST00000472585 MKL2Q9ULH7 1088 aa8.81□□□□□ -1
VCL-204ENST00000472585 PPT2Q9UMR5 302 aa8.81□□□□□ -1
VCL-204ENST00000472585 EDARQ9UNE0 448 aa8.81□□□□□ -1
VCL-204ENST00000472585 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.81□□□□□ -1
VCL-204ENST00000472585 REXO2Q9Y3B8 237 aaKnown RBP8.81□□□□□ -1
VCL-204ENST00000472585 COL6A5A8TX70 2615 aa8.8□□□□□ -1
VCL-204ENST00000472585 ASPDHA6ND91 283 aa8.8□□□□□ -1
VCL-204ENST00000472585 NPIPA5E9PKD4 350 aa8.8□□□□□ -1
VCL-204ENST00000472585 E9PLN8 166 aa8.8□□□□□ -1
VCL-204ENST00000472585 PRRG2O14669 202 aa8.8□□□□□ -1
VCL-204ENST00000472585 TTI1O43156 1089 aa8.8□□□□□ -1
VCL-204ENST00000472585 KDM1AO60341 852 aa8.8□□□□□ -1
VCL-204ENST00000472585 SEC24DO94855 1032 aaPredicted RBP8.8□□□□□ -1
VCL-204ENST00000472585 SUN1O94901 812 aa8.8□□□□□ -1
VCL-204ENST00000472585 FKBP9O95302 570 aa8.8□□□□□ -1
VCL-204ENST00000472585 MATN4O95460 622 aa8.8□□□□□ -1
VCL-204ENST00000472585 TSPAN12O95859 305 aa8.8□□□□□ -1
VCL-204ENST00000472585 APOA4P06727 396 aa8.8□□□□□ -1
VCL-204ENST00000472585 ERGP11308 486 aa8.8□□□□□ -1
VCL-204ENST00000472585 NR0B1P51843 470 aaKnown RBP8.8□□□□□ -1
VCL-204ENST00000472585 MYBPHQ13203 477 aa8.8□□□□□ -1
VCL-204ENST00000472585 GBX1Q14549 363 aa8.8□□□□□ -1
VCL-204ENST00000472585 ACER2Q5QJU3 275 aa8.8□□□□□ -1
VCL-204ENST00000472585 ZNF425Q6IV72 752 aa8.8□□□□□ -1
VCL-204ENST00000472585 AFTPHQ6ULP2 937 aa8.8□□□□□ -1
VCL-204ENST00000472585 BIVMQ86UB2 503 aa8.8□□□□□ -1
VCL-204ENST00000472585 ZNF227Q86WZ6 799 aa8.8□□□□□ -1
VCL-204ENST00000472585 PLD3Q8IV08 490 aa8.8□□□□□ -1
VCL-204ENST00000472585 CSNK1A1LQ8N752 337 aa8.8□□□□□ -1
VCL-204ENST00000472585 LRRC57Q8N9N7 239 aa8.8□□□□□ -1
VCL-204ENST00000472585 OR6P1Q8NGX9 317 aa8.8□□□□□ -1
VCL-204ENST00000472585 NRGNQ92686 78 aa8.8□□□□□ -1
VCL-204ENST00000472585 SCMH1Q96GD3 660 aa8.8□□□□□ -1
VCL-204ENST00000472585 CCDC138Q96M89 665 aa8.8□□□□□ -1
VCL-204ENST00000472585 FRMD6Q96NE9 622 aa8.8□□□□□ -1
VCL-204ENST00000472585 BIRC8Q96P09 236 aa8.8□□□□□ -1
VCL-204ENST00000472585 DMRTA2Q96SC8 542 aa8.8□□□□□ -1
VCL-204ENST00000472585 CYTH2Q99418 400 aa8.8□□□□□ -1
VCL-204ENST00000472585 MACROD1Q9BQ69 325 aa8.8□□□□□ -1
VCL-204ENST00000472585 VKORC1Q9BQB6 163 aa8.8□□□□□ -1
VCL-204ENST00000472585 LACRTQ9GZZ8 138 aa8.8□□□□□ -1
VCL-204ENST00000472585 KLHL1Q9NR64 748 aa8.8□□□□□ -1
VCL-204ENST00000472585 CHRAC1Q9NRG0 131 aa8.8□□□□□ -1
VCL-204ENST00000472585 RIC8BQ9NVN3 520 aa8.8□□□□□ -1
VCL-204ENST00000472585 KCNN3Q9UGI6 736 aa8.8□□□□□ -1
VCL-204ENST00000472585 TEKT2Q9UIF3 430 aa8.8□□□□□ -1
VCL-204ENST00000472585 RIMKLBQ9ULI2 386 aa8.8□□□□□ -1
VCL-204ENST00000472585 NPIPA1Q9UND3 350 aa8.8□□□□□ -1
VCL-204ENST00000472585 ASB1Q9Y576 335 aa8.8□□□□□ -1
VCL-204ENST00000472585 SCN2AQ99250 2005 aa8.8□□□□□ -1
VCL-204ENST00000472585 GRID2IPA4D2P6 1211 aa8.79□□□□□ -1
VCL-204ENST00000472585 ARHGEF33A8MVX0 844 aa8.79□□□□□ -1
VCL-204ENST00000472585 AKR1B15C9JRZ8 316 aaPredicted RBP8.79□□□□□ -1
VCL-204ENST00000472585 PRMT5O14744 637 aaPredicted RBP8.79□□□□□ -1
VCL-204ENST00000472585 ASNA1O43681 348 aa8.79□□□□□ -1
VCL-204ENST00000472585 DNAJB6O75190 326 aa8.79□□□□□ -1
VCL-204ENST00000472585 NEURL1O76050 574 aa8.79□□□□□ -1
VCL-204ENST00000472585 TJP3O95049 919 aa8.79□□□□□ -1
VCL-204ENST00000472585 RPN2P04844 631 aa8.79□□□□□ -1
VCL-204ENST00000472585 ICAM2P13598 275 aa8.79□□□□□ -1
VCL-204ENST00000472585 ADRA1DP25100 572 aa8.79□□□□□ -1
VCL-204ENST00000472585 ARNTP27540 789 aa8.79□□□□□ -1
VCL-204ENST00000472585 RWDD2BP57060 319 aa8.79□□□□□ -1
VCL-204ENST00000472585 CRADDP78560 199 aa8.79□□□□□ -1
VCL-204ENST00000472585 CDH17Q12864 832 aa8.79□□□□□ -1
VCL-204ENST00000472585 SKOR2Q2VWA4 1001 aaPredicted RBP8.79□□□□□ -1
VCL-204ENST00000472585 FASTKD1Q53R41 847 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms