RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 CMC1Q7Z7K0 106 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 ADAMTSL2Q86TH1 951 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 THOC6Q86W42 341 aaKnown RBP8.72□□□□□ -1.01
SYN3-211ENST00000472027 RAB43Q86YS6 212 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 ARHGEF39Q8N4T4 335 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 ABHD11Q8NFV4 315 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 OR4K1Q8NGD4 311 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 FKBP10Q96AY3 582 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 RHBDF1Q96CC6 855 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 TM4SF19Q96DZ7 209 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 THAP11Q96EK4 314 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 CYTH2Q99418 400 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 FMO2Q99518 471 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 MACROD1Q9BQ69 325 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 TRIM55Q9BYV6 548 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 ING2Q9H160 280 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 SLC26A1Q9H2B4 701 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 ACSS2Q9NR19 701 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 TLK1Q9UKI8 766 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 CDC14AQ9UNH5 594 aa8.72□□□□□ -1.01
SYN3-211ENST00000472027 A0A0A6YYC8 382 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 HMX2A2RU54 273 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 NCF1BA6NI72 391 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 VSTM2BA6NLU5 285 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 NCF1CA8MVU1 366 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 MKRN2OSH3BPM6 223 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 I3L1I5 382 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 TAPBPO15533 448 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 FOXS1O43638 330 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 RFPL1O75677 317 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 ACSL3O95573 720 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 STATHP02808 62 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 SLC35E2BP0CK96 405 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 NCF1P14598 390 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 CRABP2P29373 138 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 SLC26A3P40879 764 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 BCL6P41182 706 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 GDF5P43026 501 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 KCNC1P48547 511 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 CCR8P51685 355 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 SNRPNP63162 240 aaKnown RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 MEF2AQ02078 507 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 OCA2Q04671 838 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 DLG1Q12959 904 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 ATP1A4Q13733 1029 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 FAM53BQ14153 422 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 SLMAPQ14BN4 828 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 OR4D1Q15615 310 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 UAP1Q16222 522 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 NDUFA9Q16795 377 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 C18orf21Q32NC0 220 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 MROH9Q5TGP6 573 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 CPZQ66K79 652 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 SHISA6Q6ZSJ9 500 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 MED25Q71SY5 747 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 VN1R4Q7Z5H5 301 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 ZNF605Q86T29 641 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 ASPGQ86U10 573 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 ISCA2Q86U28 154 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 PTRH1Q86Y79 214 aaKnown RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 GPSM1Q86YR5 675 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 IFT20Q8IY31 132 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 TMEM102Q8N9M5 508 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 MFSD9Q8NBP5 474 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 CAMKVQ8NCB2 501 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 C9orf43Q8TAL5 461 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 SLC13A3Q8WWT9 602 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 SLC5A11Q8WWX8 675 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 NEIL2Q969S2 332 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 KIAA1191Q96A73 305 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 MVB12AQ96EY5 273 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 MMABQ96EY8 250 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 TSNARE1Q96NA8 513 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 IP6K3Q96PC2 410 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 SPSB2Q99619 263 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 SARGQ9BW04 601 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 YIPF2Q9BWQ6 316 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 FUT8Q9BYC5 575 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 SOX17Q9H6I2 414 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 ACSS3Q9H6R3 686 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 WDR54Q9H977 334 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 ZNF71Q9NQZ8 489 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 CTSFQ9UBX1 484 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 ZNF282Q9UDV7 671 aaPredicted RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 NFU1Q9UMS0 254 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 DYRK1BQ9Y463 629 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 KCNE2Q9Y6J6 123 aa8.71□□□□□ -1.02
SYN3-211ENST00000472027 SNRNP200O75643 2136 aaKnown RBP8.71□□□□□ -1.02
SYN3-211ENST00000472027 IGLV3-12A0A075B6K2 115 aa8.7□□□□□ -1.02
SYN3-211ENST00000472027 TRBC2A0A5B9 178 aa8.7□□□□□ -1.02
SYN3-211ENST00000472027 K7EM74 188 aa8.7□□□□□ -1.02
SYN3-211ENST00000472027 PEX12O00623 359 aa8.7□□□□□ -1.02
SYN3-211ENST00000472027 PRPF4O43172 522 aaKnown RBP eCLIP8.7□□□□□ -1.02
SYN3-211ENST00000472027 OR1F1O43749 312 aa8.7□□□□□ -1.02
SYN3-211ENST00000472027 WDR47O94967 919 aa8.7□□□□□ -1.02
SYN3-211ENST00000472027 C2P06681 752 aa8.7□□□□□ -1.02
SYN3-211ENST00000472027 LTA4HP09960 611 aaKnown RBP8.7□□□□□ -1.02
SYN3-211ENST00000472027 ZGLP1P0C6A0 271 aa8.7□□□□□ -1.02
SYN3-211ENST00000472027 RHOXF2BP0C7M4 288 aa8.7□□□□□ -1.02
SYN3-211ENST00000472027 SPTBP11277 2137 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms