RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ENO1P06733 434 aaKnown RBP18.41■□□□□ 0.54
PSPC1-203ENST00000471658 UROSP10746 265 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 DRD4P21917 467 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 HMOX2P30519 316 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 HNF4AP41235 474 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 CBX1P83916 185 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 CACHD1Q5VU97 1274 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 TMEM71Q6P5X7 295 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 WDR75Q8IWA0 830 aaKnown RBP18.41■□□□□ 0.54
PSPC1-203ENST00000471658 ANKRD53Q8N9V6 530 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 RFWD2Q8NHY2 731 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 PIWIL2Q8TC59 973 aaKnown RBP18.41■□□□□ 0.54
PSPC1-203ENST00000471658 PPP1R36Q96LQ0 422 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 AIF1LQ9BQI0 150 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 MN1Q10571 1320 aaPredicted RBP18.41■□□□□ 0.54
PSPC1-203ENST00000471658 ZNF292O60281 2723 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 TLCD2A6NGC4 264 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 MANBAO00462 879 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 NTN3O00634 580 aaPredicted RBP18.41■□□□□ 0.54
PSPC1-203ENST00000471658 OR1F1O43749 312 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 SNUPNO95149 360 aaKnown RBP18.41■□□□□ 0.54
PSPC1-203ENST00000471658 GP1BAP07359 652 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 PCNAP12004 261 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 BCL6P41182 706 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 SEPHS1P49903 392 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 PDCD2Q16342 344 aaPredicted RBP18.41■□□□□ 0.54
PSPC1-203ENST00000471658 VWA5B1Q5TIE3 1220 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 MED27Q6P2C8 311 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 MAVSQ7Z434 540 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 OR7G3Q8NG95 312 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 ZUFSPQ96AP4 578 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 SLC29A3Q9BZD2 475 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 NPHS2Q9NP85 383 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 KLK4Q9Y5K2 254 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 AGRPO00253 132 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 ZNF195O14628 629 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 HCRTR1O43613 425 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 FKBP9O95302 570 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 PDYNP01213 254 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 STATHP02808 62 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 HRH2P25021 359 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 LIMK1P53667 647 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 CYP4F3Q08477 520 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 LAPTM5Q13571 262 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 DDX39BQ13838 428 aaKnown RBP18.4■□□□□ 0.54
PSPC1-203ENST00000471658 ABRAXAS2Q15018 415 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 TRIP6Q15654 476 aaKnown RBP18.4■□□□□ 0.54
PSPC1-203ENST00000471658 HIST2H2ACQ16777 129 aaPredicted RBP18.4■□□□□ 0.54
PSPC1-203ENST00000471658 PAGE2BQ5JRK9 111 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 HIST2H2AA3Q6FI13 130 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 TMIGD1Q6UXZ0 262 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 VN1R5Q7Z5H4 357 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 KRT78Q8N1N4 520 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 C19orf47Q8N9M1 422 aaKnown RBP18.4■□□□□ 0.54
PSPC1-203ENST00000471658 WDR20Q8TBZ3 569 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 TWIST2Q8WVJ9 160 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 GFM1Q96RP9 751 aaKnown RBP18.4■□□□□ 0.54
PSPC1-203ENST00000471658 CD180Q99467 661 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 NUF2Q9BZD4 464 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 TOR4AQ9NXH8 423 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 HEATR5BQ9P2D3 2071 aa18.4■□□□□ 0.54
PSPC1-203ENST00000471658 A0A0J9YVX5 310 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 H0YIV9 168 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 PIP5K1BO14986 540 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 LINC00032P0C843 101 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 CLDN6P56747 220 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 CYP4F2P78329 520 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 BTKQ06187 659 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 COL9A2Q14055 689 aaPredicted RBP18.39■□□□□ 0.53
PSPC1-203ENST00000471658 TUBB8Q3ZCM7 444 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 FRG2Q64ET8 278 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.39■□□□□ 0.53
PSPC1-203ENST00000471658 LAS2Q8IYD9 372 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 C3orf30Q96M34 536 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 FRG2BQ96QU4 278 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 MTERF1Q99551 399 aaKnown RBP18.39■□□□□ 0.53
PSPC1-203ENST00000471658 MACROD1Q9BQ69 325 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 EPN3Q9H201 632 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 ELOVL6Q9H5J4 265 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 DCTN4Q9UJW0 460 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 PILRAQ9UKJ1 303 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 SNX6Q9UNH7 406 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 PCDHGA11Q9Y5H2 935 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 USH1CQ9Y6N9 552 aa18.39■□□□□ 0.53
PSPC1-203ENST00000471658 IGHV5-10-1A0A0J9YXX1 117 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 TRBC2A0A5B9 178 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 SH3BGRLO75368 114 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 CTSBP07858 339 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 SCTRP47872 440 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 DEFB110Q30KQ9 67 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 FRMPD2BQ6IN97 320 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 RCBTB1Q8NDN9 531 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 OR4D9Q8NGE8 314 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 HUS1BQ8NHY5 278 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 SELENOMQ8WWX9 145 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 USP7Q93009 1102 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 ELAC2Q9BQ52 826 aaKnown RBP18.38■□□□□ 0.53
PSPC1-203ENST00000471658 SEMA5BQ9P283 1151 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 ANKMY1Q9P2S6 941 aa18.38■□□□□ 0.53
PSPC1-203ENST00000471658 LOC105369274A0A096LPK9 316 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms