RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 MS4A12Q9NXJ0 267 aa13.33□□□□□ -0.28
NPHP4-207ENST00000470763 SNX7Q9UNH6 387 aa13.33□□□□□ -0.28
NPHP4-207ENST00000470763 PTCH2Q9Y6C5 1203 aa13.33□□□□□ -0.28
NPHP4-207ENST00000470763 WNT9AO14904 365 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 GPR182O15218 404 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 NOS1APO75052 506 aaPredicted RBP13.32□□□□□ -0.28
NPHP4-207ENST00000470763 CYP2A6P11509 494 aaPredicted RBP13.32□□□□□ -0.28
NPHP4-207ENST00000470763 SSTR4P31391 388 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 LHX1P48742 406 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 ARHGEF6Q15052 776 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 UBXN11Q5T124 520 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 SLC44A2Q8IWA5 706 aaPredicted RBP13.32□□□□□ -0.28
NPHP4-207ENST00000470763 ZFAND1Q8TCF1 268 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 BHMTQ93088 406 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 TBC1D20Q96BZ9 403 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 ARHGAP39Q9C0H5 1083 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 SRRQ9GZT4 340 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 SLC22A4Q9H015 551 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 ASAH2Q9NR71 780 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 RLIMQ9NVW2 624 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 TMPRSS11EQ9UL52 423 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 KLK4Q9Y5K2 254 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 DOCK4Q8N1I0 1966 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 RFXANKO14593 260 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 TSC22D2O75157 780 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 ULK1O75385 1050 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 C9P02748 559 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 DDX5P17844 614 aaKnown RBP13.32□□□□□ -0.28
NPHP4-207ENST00000470763 HLA-DPA1P20036 260 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 CD72P21854 359 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 TACR1P25103 407 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 PTPN6P29350 595 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 ACVRL1P37023 503 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 RPS5P46782 204 aaKnown RBP13.32□□□□□ -0.28
NPHP4-207ENST00000470763 RGS19P49795 217 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 MLLT6P55198 1093 aaPredicted RBP13.32□□□□□ -0.28
NPHP4-207ENST00000470763 SSX1Q16384 188 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 SLC39A12Q504Y0 691 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 USP39Q53GS9 565 aaKnown RBP13.32□□□□□ -0.28
NPHP4-207ENST00000470763 TJAP1Q5JTD0 557 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 C17orf99Q6UX52 265 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 GLT6D1Q7Z4J2 308 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 AMIGO1Q86WK6 493 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 B3GNT7Q8NFL0 401 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 NACC2Q96BF6 587 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 EXOC2Q96KP1 924 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 FRMD6Q96NE9 622 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 CCM2Q9BSQ5 444 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 APOL5Q9BWW9 433 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 KCNH6Q9H252 994 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 B8ZZF3 427 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 ARHGEF9O43307 516 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 WDR47O94967 919 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 ESR1P03372 595 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 TRAPPC2P0DI81 140 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 TRAPPC2BP0DI82 140 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 KDELR2P33947 212 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 SOX3P41225 446 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 DGKEP52429 567 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 NKX3-2P78367 333 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 SCN1BQ07699 218 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 ZNF235Q14590 738 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 ZRANB3Q5FWF4 1079 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 NADSYN1Q6IA69 706 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 FAM131AQ6UXB0 335 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 ATCAYQ86WG3 371 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 UMODL1-AS1Q8N2C9 162 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 EFHBQ8N7U6 833 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 PPTC7Q8NI37 304 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 TRMT61AQ96FX7 289 aaKnown RBP13.32□□□□□ -0.28
NPHP4-207ENST00000470763 POLR1EQ9GZS1 481 aaKnown RBP13.32□□□□□ -0.28
NPHP4-207ENST00000470763 NMUR1Q9HB89 426 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 FKBP14Q9NWM8 211 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 ZNF226Q9NYT6 803 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 FKBPLQ9UIM3 349 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 OGDHLQ9ULD0 1010 aa13.32□□□□□ -0.28
NPHP4-207ENST00000470763 DNAJC25-GNG10A0A024R161 153 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 CASTOR2A6NHX0 329 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 NT5C1B-RDH14C9J2C7 533 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 POU2F1P14859 743 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 TNFRSF1BP20333 461 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 CTGFP29279 349 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 ITGA1P56199 1179 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 OLR1P78380 273 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 LRIF1Q5T3J3 769 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 PXDC1Q5TGL8 231 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 TWF2Q6IBS0 349 aaKnown RBP13.31□□□□□ -0.28
NPHP4-207ENST00000470763 OR4F3Q6IEY1 312 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 AFTPHQ6ULP2 937 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 MDGA1Q8NFP4 955 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 DNAJB3Q8WWF6 145 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 EGFL8Q99944 293 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 HDHD5Q9BXW7 423 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 PLCXD1Q9NUJ7 323 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 NUDT4Q9NZJ9 180 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 HSPB11Q9Y547 144 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 A0A075B6Q4 140 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 SMIM30A4D0T7 59 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 PSKH1P11801 424 aa13.31□□□□□ -0.28
NPHP4-207ENST00000470763 ERP29P30040 261 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms