RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 NAT14Q8WUY8 206 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 ZCCHC14Q8WYQ9 949 aaKnown RBP6.42□□□□□ -1.38
VAMP3-202ENST00000470357 DLG3Q92796 817 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 TSACCQ96A04 125 aaPredicted RBP6.42□□□□□ -1.38
VAMP3-202ENST00000470357 ATP6V1E2Q96A05 226 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 C12orf66Q96MD2 445 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 SLC6A18Q96N87 628 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 SORT1Q99523 831 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 MIPEPQ99797 713 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 HAUS8Q9BT25 410 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 HGH1Q9BTY7 390 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 NTMT1Q9BV86 223 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 NUSAP1Q9BXS6 441 aaKnown RBP6.42□□□□□ -1.38
VAMP3-202ENST00000470357 ZDHHC5Q9C0B5 715 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 MIR1-1HGQ9H1L0 117 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 ERVMER34-1Q9H9K5 563 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 EBF2Q9HAK2 575 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 TM9SF3Q9HD45 589 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 MRPL40Q9NQ50 206 aaKnown RBP6.42□□□□□ -1.38
VAMP3-202ENST00000470357 DNAJC11Q9NVH1 559 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 GPRC5BQ9NZH0 403 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 SPASTQ9UBP0 616 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 PCTPQ9UKL6 214 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 IKZF3Q9UKT9 509 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 KCNK6Q9Y257 313 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 CA5BQ9Y2D0 317 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 MSRB2Q9Y3D2 182 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 PRKAB1Q9Y478 270 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 KNL1Q8NG31 2342 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 KALRNO60229 2985 aa6.42□□□□□ -1.38
VAMP3-202ENST00000470357 CFAP46Q8IYW2 2715 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 A0A0G2JND7 137 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 KIAA1324LA8MWY0 1029 aaPredicted RBP6.41□□□□□ -1.38
VAMP3-202ENST00000470357 MATN2O00339 956 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 EBAG9O00559 213 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 CLGNO14967 610 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 AZIN1O14977 448 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 YKT6O15498 198 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 TAPBPO15533 448 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 ITM2AO43736 263 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 CCNT2O60583 730 aaKnown RBP6.41□□□□□ -1.38
VAMP3-202ENST00000470357 VPS4BO75351 444 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 LYPLA1O75608 230 aaPredicted RBP6.41□□□□□ -1.38
VAMP3-202ENST00000470357 WDR47O94967 919 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 SIX3O95343 332 aaPredicted RBP6.41□□□□□ -1.38
VAMP3-202ENST00000470357 SLC16A8O95907 504 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 FUCA1P04066 466 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 CSF2P04141 144 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 CHRNGP07510 517 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 EBLN1P0CF75 366 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 UROSP10746 265 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 ERGP11308 486 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 NME1P15531 152 aaKnown RBP6.41□□□□□ -1.38
VAMP3-202ENST00000470357 GNAZP19086 355 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 BCKDHBP21953 392 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 SHMT2P34897 504 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 ARL1P40616 181 aaPredicted RBP6.41□□□□□ -1.38
VAMP3-202ENST00000470357 BDKRB1P46663 353 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 SLC6A12P48065 614 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 HSPA7P48741 367 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 ARRB1P49407 418 aaPredicted RBP6.41□□□□□ -1.38
VAMP3-202ENST00000470357 AGTR2P50052 363 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 CCNG1P51959 295 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 NXPH1P58417 271 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 ZNF33BQ06732 778 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 EIF2B5Q13144 721 aaKnown RBP6.41□□□□□ -1.38
VAMP3-202ENST00000470357 NAA25Q14CX7 972 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 RPE65Q16518 533 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 CPSF6Q16630 551 aaKnown RBP eCLIP6.41□□□□□ -1.38
VAMP3-202ENST00000470357 PTCHD3Q3KNS1 767 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 CYP27C1Q4G0S4 372 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.41□□□□□ -1.38
VAMP3-202ENST00000470357 WIPI1Q5MNZ9 446 aaPredicted RBP6.41□□□□□ -1.38
VAMP3-202ENST00000470357 SH2D4BQ5SQS7 431 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 METTL21CQ5VZV1 264 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 RNF165Q6ZSG1 346 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 TAF8Q7Z7C8 310 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 GKN2Q86XP6 184 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 TRIM48Q8IWZ4 208 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 SYTL1Q8IYJ3 562 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 TMEFF1Q8IYR6 380 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 SLC22A18ASQ8N1D0 253 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 TEX9Q8N6V9 391 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 FRMD1Q8N878 549 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 ZNF781Q8N8C0 355 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 GBP7Q8N8V2 638 aaPredicted RBP6.41□□□□□ -1.38
VAMP3-202ENST00000470357 SNX31Q8N9S9 440 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 OR56A3Q8NH54 315 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 CEP76Q8TAP6 659 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 HMGCLL1Q8TB92 370 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 AGAP11Q8TF27 550 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 SMPDL3AQ92484 453 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 CCT6BQ92526 530 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 CXorf40BQ96DE9 158 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 SEC16BQ96JE7 1060 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 RMDN2Q96LZ7 410 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 BBC3Q96PG8 261 aaPredicted RBP6.41□□□□□ -1.38
VAMP3-202ENST00000470357 PSMG3-AS1Q96PY0 264 aa6.41□□□□□ -1.38
VAMP3-202ENST00000470357 FERD3LQ96RJ6 166 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms