RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 C14orf105Q9NVL8 296 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 FBXO5Q9UKT4 447 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 PPP2R2CQ9Y2T4 447 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 NEU2Q9Y3R4 380 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 OR2W5A6NFC9 320 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 JRKO75564 520 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 BMP10O95393 424 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 UQCRHP07919 91 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 ITGAMP11215 1152 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 ENO3P13929 434 aaPredicted RBP12.59□□□□□ -0.39
CPSF4-210ENST00000469897 IMPA1P29218 277 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 SOX11P35716 441 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 AVPR1BP47901 424 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 TNFSF10P50591 281 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 FAM53BQ14153 422 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 PCOLCEQ15113 449 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 NDUFA9Q16795 377 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 TMEM205Q6UW68 189 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 ZC3H7AQ8IWR0 971 aaKnown RBP12.59□□□□□ -0.39
CPSF4-210ENST00000469897 NAT8LQ8N9F0 302 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 CD200R1Q8TD46 325 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 EEF1AKMT1Q8WVE0 214 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 CYTH2Q99418 400 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 AARSD1Q9BTE6 412 aaKnown RBP12.59□□□□□ -0.39
CPSF4-210ENST00000469897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.59□□□□□ -0.39
CPSF4-210ENST00000469897 ZNF700Q9H0M5 742 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 OLAHQ9NV23 265 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 TMEM184CQ9NVA4 438 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 STMN3Q9NZ72 180 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 ADAMTS6Q9UKP5 1117 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 JRKLQ9Y4A0 524 aa12.59□□□□□ -0.39
CPSF4-210ENST00000469897 KCNE1BA0A087WTH5 132 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 LOC102723996A0A087X1L8 192 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 IGHV3-20A0A0C4DH32 117 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 FEZF1A0PJY2 475 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 A8MUI8 341 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 WDPCPO95876 746 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 ICAM2P13598 275 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 FDXRP22570 491 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 MAGEA3P43357 314 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 TIAL1Q01085 375 aaKnown RBP eCLIP12.58□□□□□ -0.4
CPSF4-210ENST00000469897 CYP1B1Q16678 543 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 MFSD4BQ5TF39 518 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 PRSS41Q7RTY9 318 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 VN1R4Q7Z5H5 301 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 LMNTD2Q8IXW0 634 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 BCORP1Q8N888 145 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 CALML6Q8TD86 181 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 MCOLN3Q8TDD5 553 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 ALKBH8Q96BT7 664 aaKnown RBP12.58□□□□□ -0.4
CPSF4-210ENST00000469897 IMMP1LQ96LU5 166 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 CCDC138Q96M89 665 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 TAAR6Q96RI8 345 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 NDNQ99608 321 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 SLX1AQ9BQ83 275 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 ATG10Q9H0Y0 220 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 RIC8BQ9NVN3 520 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 PDE10AQ9Y233 779 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 COMMD10Q9Y6G5 202 aa12.58□□□□□ -0.4
CPSF4-210ENST00000469897 TRAV17A0A0B4J275 112 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 A0A1W2PQ72 361 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 H0YIG0 161 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 LCMT2O60294 686 aaKnown RBP12.57□□□□□ -0.4
CPSF4-210ENST00000469897 C8orf89P0DMQ9 161 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 HRH2P25021 359 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 KCNK10P57789 538 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 CSNK1G2P78368 415 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 NAE1Q13564 534 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 MINDY4Q4G0A6 757 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 ZNF324BQ6AW86 544 aaPredicted RBP12.57□□□□□ -0.4
CPSF4-210ENST00000469897 AGTRAPQ6RW13 159 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 PAQR3Q6TCH7 311 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 RIPOR1Q6ZS17 1223 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 PPIL6Q8IXY8 311 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.57□□□□□ -0.4
CPSF4-210ENST00000469897 OR51Q1Q8NH59 317 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 METTL21AQ8WXB1 218 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 VN1R1Q9GZP7 353 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 CCDC177Q9NQR7 707 aaPredicted RBP12.57□□□□□ -0.4
CPSF4-210ENST00000469897 HCN3Q9P1Z3 774 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 TRMT6Q9UJA5 497 aaKnown RBP12.57□□□□□ -0.4
CPSF4-210ENST00000469897 SH2B3Q9UQQ2 575 aa12.57□□□□□ -0.4
CPSF4-210ENST00000469897 SGK494L7N484 410 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 PCDH17O14917 1159 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 ZG16O60844 167 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 SEC24DO94855 1032 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-210ENST00000469897 NSA2O95478 260 aaKnown RBP12.56□□□□□ -0.4
CPSF4-210ENST00000469897 AHSGP02765 367 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 STSP08842 583 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 NPPBP16860 134 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 IL1RNP18510 177 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 GABRB3P28472 473 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 BCL6P41182 706 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 RPS15AP62244 130 aaKnown RBP12.56□□□□□ -0.4
CPSF4-210ENST00000469897 TBPL1P62380 186 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 ZNF33BQ06732 778 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 PTK6Q13882 451 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 ZRSR2Q15696 482 aaKnown RBP12.56□□□□□ -0.4
CPSF4-210ENST00000469897 ABHD17BQ5VST6 288 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 C1QL3Q5VWW1 255 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms