RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 LBHQ53QV2 105 aaPredicted RBP4.49□□□□□ -1.69
XRN1-207ENST00000468894 OR4C11Q6IEV9 310 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 ENPP7Q6UWV6 458 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 FRRS1Q6ZNA5 592 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 SLC24A5Q71RS6 500 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 FCRLAQ7L513 359 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 CCDC186Q7Z3E2 898 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 ANKRD33Q7Z3H0 272 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 FAM219AQ8IW50 185 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 FAM89BQ8N5H3 189 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 METTL21AQ8WXB1 218 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 PYCR2Q96C36 320 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 PRICKLE1Q96MT3 831 aaPredicted RBP4.49□□□□□ -1.69
XRN1-207ENST00000468894 NDNQ99608 321 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 KATNB1Q9BVA0 655 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 RAVER2Q9HCJ3 691 aaKnown RBP4.49□□□□□ -1.69
XRN1-207ENST00000468894 TEX10Q9NXF1 929 aaPredicted RBP4.49□□□□□ -1.69
XRN1-207ENST00000468894 NUDT4Q9NZJ9 180 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 THEGQ9P2T0 379 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 PRDM4Q9UKN5 801 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 HEG1Q9ULI3 1381 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 ERI2A8K979 691 aaKnown RBP4.48□□□□□ -1.69
XRN1-207ENST00000468894 C17orf105B2RV13 164 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 EPM2AB3EWF7 344 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 PI4K2BG5E9Z4 385 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 PRKAR1AP10644 381 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 SP100P23497 879 aaPredicted RBP4.48□□□□□ -1.69
XRN1-207ENST00000468894 ELAVL4P26378 380 aaKnown RBP4.48□□□□□ -1.69
XRN1-207ENST00000468894 DCDC1P59894 354 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 LMO4P61968 165 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 ZNF273Q14593 569 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 FASTKD3Q14CZ7 662 aaKnown RBP4.48□□□□□ -1.69
XRN1-207ENST00000468894 MOGAT2Q3SYC2 334 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 GLIPR1L2Q4G1C9 344 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 TAF1BQ53T94 588 aaPredicted RBP4.48□□□□□ -1.69
XRN1-207ENST00000468894 CES4AQ5XG92 561 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 RCOR2Q8IZ40 523 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 AQP11Q8NBQ7 271 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 Q8NFD4 153 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 C11orf45Q8TAV5 145 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 SEPT1Q8WYJ6 367 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 GTF3AQ92664 365 aaKnown RBP4.48□□□□□ -1.69
XRN1-207ENST00000468894 ANKRD9Q96BM1 317 aaPredicted RBP4.48□□□□□ -1.69
XRN1-207ENST00000468894 ERP27Q96DN0 273 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 OMA1Q96E52 524 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 CDCA3Q99618 268 aaPredicted RBP4.48□□□□□ -1.69
XRN1-207ENST00000468894 OVOL2Q9BRP0 275 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 GTPBP2Q9BX10 602 aaKnown RBP4.48□□□□□ -1.69
XRN1-207ENST00000468894 SDCBP2Q9H190 292 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 EGLN3Q9H6Z9 239 aa4.48□□□□□ -1.69
XRN1-207ENST00000468894 ELF5Q9UKW6 265 aaPredicted RBP4.48□□□□□ -1.69
XRN1-207ENST00000468894 IDH3BO43837 385 aa4.47□□□□□ -1.69
XRN1-207ENST00000468894 CD59P13987 128 aa4.47□□□□□ -1.69
XRN1-207ENST00000468894 PTAFRP25105 342 aa4.47□□□□□ -1.69
XRN1-207ENST00000468894 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
XRN1-207ENST00000468894 ERN2Q76MJ5 926 aaKnown RBP4.47□□□□□ -1.69
XRN1-207ENST00000468894 ABI3BPQ7Z7G0 1075 aa4.47□□□□□ -1.69
XRN1-207ENST00000468894 GPC2Q8N158 579 aa4.47□□□□□ -1.69
XRN1-207ENST00000468894 CCAR2Q8N163 923 aaKnown RBP4.47□□□□□ -1.69
XRN1-207ENST00000468894 Q8NBF4 154 aa4.47□□□□□ -1.69
XRN1-207ENST00000468894 NUP37Q8NFH4 326 aa4.47□□□□□ -1.69
XRN1-207ENST00000468894 KIF18AQ8NI77 898 aa4.47□□□□□ -1.69
XRN1-207ENST00000468894 P2RX5Q93086 422 aa4.47□□□□□ -1.69
XRN1-207ENST00000468894 BTBD9Q96Q07 612 aa4.47□□□□□ -1.69
XRN1-207ENST00000468894 LRRC61Q9BV99 259 aa4.47□□□□□ -1.69
XRN1-207ENST00000468894 UBXN6Q9BZV1 441 aa4.47□□□□□ -1.69
XRN1-207ENST00000468894 HOXD1Q9GZZ0 328 aa4.47□□□□□ -1.69
XRN1-207ENST00000468894 PHPT1Q9NRX4 125 aaPredicted RBP4.47□□□□□ -1.69
XRN1-207ENST00000468894 MYH14Q7Z406 1995 aaKnown RBP4.47□□□□□ -1.69
XRN1-207ENST00000468894 PCNX3Q9H6A9 2034 aa4.46□□□□□ -1.69
XRN1-207ENST00000468894 DKC1O60832 514 aaKnown RBP eCLIP4.46□□□□□ -1.7
XRN1-207ENST00000468894 CEACAM4O75871 244 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 F3P13726 295 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 MYL6BP14649 208 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 NPY4RP50391 375 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 ZNF41P51814 821 aaPredicted RBP4.46□□□□□ -1.7
XRN1-207ENST00000468894 TMEM50BP56557 158 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 OR1D5P58170 312 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 CACNG1Q06432 222 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 SGCGQ13326 291 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 LY6DQ14210 128 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 C6orf136Q5SQH8 315 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 PAQR6Q6TCH4 344 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 SUSD1Q6UWL2 747 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 CPEB2Q7Z5Q1 589 aaKnown RBP4.46□□□□□ -1.7
XRN1-207ENST00000468894 IQUBQ8NA54 791 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 CNRIP1Q96F85 164 aaPredicted RBP4.46□□□□□ -1.7
XRN1-207ENST00000468894 NDE1Q9NXR1 346 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 KLK13Q9UKR3 277 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 WIPI2Q9Y4P8 454 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 SELENOKQ9Y6D0 94 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 MYH15Q9Y2K3 1946 aa4.46□□□□□ -1.7
XRN1-207ENST00000468894 IGHV3OR16-10A0A075B7F0 116 aa4.45□□□□□ -1.7
XRN1-207ENST00000468894 F8VVB4 439 aa4.45□□□□□ -1.7
XRN1-207ENST00000468894 F8VWA3 439 aa4.45□□□□□ -1.7
XRN1-207ENST00000468894 G3V2L1 256 aa4.45□□□□□ -1.7
XRN1-207ENST00000468894 STAG3L1P0CL83 205 aa4.45□□□□□ -1.7
XRN1-207ENST00000468894 PSMA3P25788 255 aa4.45□□□□□ -1.7
XRN1-207ENST00000468894 RBMS1P29558 406 aaKnown RBP4.45□□□□□ -1.7
XRN1-207ENST00000468894 DUTP33316 252 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms