RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 RIBC1Q8N443 379 aaPredicted RBP10.56□□□□□ -0.72
MSH5-212ENST00000467319 TMEM151AQ8N4L1 468 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 ZNF655Q8N720 491 aaPredicted RBP10.56□□□□□ -0.72
MSH5-212ENST00000467319 OR2W6PQ8NHA6 318 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 PROKR1Q8TCW9 393 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 CT55Q8WUE5 264 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 N4BP2L2Q92802 583 aaPredicted RBP10.56□□□□□ -0.72
MSH5-212ENST00000467319 ALKBH8Q96BT7 664 aaKnown RBP10.56□□□□□ -0.72
MSH5-212ENST00000467319 WDR34Q96EX3 536 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 C10orf90Q96M02 699 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 TSNARE1Q96NA8 513 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 PRAP1Q96NZ9 151 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 DPH2Q9BQC3 489 aaPredicted RBP10.56□□□□□ -0.72
MSH5-212ENST00000467319 TMEM109Q9BVC6 243 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 CD244Q9BZW8 370 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 FAM117AQ9C073 453 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 SPNS1Q9H2V7 528 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 MRPL46Q9H2W6 279 aaKnown RBP10.56□□□□□ -0.72
MSH5-212ENST00000467319 EHD1Q9H4M9 534 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 LHX9Q9NQ69 397 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 DNAJC11Q9NVH1 559 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 GPRC5BQ9NZH0 403 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 COPG2Q9UBF2 871 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 TBK1Q9UHD2 729 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 PCDHGA4Q9Y5G9 962 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 KCNE2Q9Y6J6 123 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 ATMQ13315 3056 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 IGSF10Q6WRI0 2623 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 A0A1B0GX78 115 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 TRBC2A0A5B9 178 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 C21orf140B9A014 251 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 MEN1O00255 615 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 DSCR3O14972 297 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 EFSO43281 561 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 PRAMEF4O60810 478 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 STK16O75716 305 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 S100BP04271 92 aaPredicted RBP10.55□□□□□ -0.72
MSH5-212ENST00000467319 CAPN1P07384 714 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 RBP1P09455 135 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 GNAZP19086 355 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 NFKB2Q00653 900 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 PDK4Q16654 411 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 FBXO48Q5FWF7 155 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 WASHC2DQ5SRD0 308 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 PRAMEF9Q5VWM5 478 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 METTL2BQ6P1Q9 378 aaKnown RBP10.55□□□□□ -0.72
MSH5-212ENST00000467319 NXPE4Q6UWF7 544 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 LRRC69Q6ZNQ3 347 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 ADCK2Q7Z695 626 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 CYP4X1Q8N118 509 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 IL22RA1Q8N6P7 574 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 CSNK1A1LQ8N752 337 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 ZNF740Q8NDX6 193 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 TM4SF19Q96DZ7 209 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 THAP11Q96EK4 314 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 CCNL2Q96S94 520 aaPredicted RBP10.55□□□□□ -0.72
MSH5-212ENST00000467319 MRPL57Q9BQC6 102 aaKnown RBP10.55□□□□□ -0.72
MSH5-212ENST00000467319 NDC1Q9BTX1 674 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 AKIRIN1Q9H9L7 192 aaPredicted RBP10.55□□□□□ -0.72
MSH5-212ENST00000467319 MKS1Q9NXB0 559 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 CROTQ9UKG9 612 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 TMCO1Q9UM00 188 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 RUVBL1Q9Y265 456 aaKnown RBP10.55□□□□□ -0.72
MSH5-212ENST00000467319 DYRK1BQ9Y463 629 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 PCDHGA6Q9Y5G7 932 aa10.55□□□□□ -0.72
MSH5-212ENST00000467319 A0A1W2PPM1 405 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 CCDC151A5D8V7 595 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 SMIM23A6NLE4 172 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 FOXO6A8MYZ6 492 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 STX16-NPEPL1H3BU86 382 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 K7ENP7 123 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 K7EPI3 171 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 STX16O14662 325 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 MAP2K7O14733 419 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 GSTA1P08263 222 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 PYGBP11216 843 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 GFAPP14136 432 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 CD22P20273 847 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 F8A1P23610 371 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 SCTRP47872 440 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 ARSFP54793 590 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 TMPRSS3P57727 454 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 SNRPNP63162 240 aaKnown RBP10.54□□□□□ -0.72
MSH5-212ENST00000467319 ZNF844Q08AG5 666 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 DNASE1L3Q13609 305 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 PCBP2Q15366 365 aaKnown RBP eCLIP10.54□□□□□ -0.72
MSH5-212ENST00000467319 PFKFB4Q16877 469 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 HKDC1Q2TB90 917 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 MANEAQ5SRI9 462 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 ATG9BQ674R7 924 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 LCN10Q6JVE6 187 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 INO80CQ6PI98 192 aaPredicted RBP10.54□□□□□ -0.72
MSH5-212ENST00000467319 MFSD9Q8NBP5 474 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 ESAMQ96AP7 390 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 CLIP3Q96DZ5 547 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 CRELD1Q96HD1 420 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 SLC45A3Q96JT2 553 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 ROPN1BQ9BZX4 212 aaPredicted RBP10.54□□□□□ -0.72
MSH5-212ENST00000467319 CHST8Q9H2A9 424 aa10.54□□□□□ -0.72
MSH5-212ENST00000467319 PRORYQ9H606 182 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms