RNA–Protein interactions for RNA: ENST00000466950.5

SEC22A-203, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-203ENST00000466950 SCTRP47872 440 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 LSSP48449 732 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 FOXA1P55317 472 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 GFERP55789 205 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 RPS15AP62244 130 aaKnown RBP12.68□□□□□ -0.38
SEC22A-203ENST00000466950 CFHR1Q03591 330 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 FRG2Q64ET8 278 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 CLEC6AQ6EIG7 209 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 MED27Q6P2C8 311 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 FIGLAQ6QHK4 219 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 TMIGD1Q6UXZ0 262 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 RNF44Q7L0R7 432 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 DCBLD1Q8N8Z6 715 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 Q8N9G6 341 aaPredicted RBP12.68□□□□□ -0.38
SEC22A-203ENST00000466950 C19orf47Q8N9M1 422 aaKnown RBP12.68□□□□□ -0.38
SEC22A-203ENST00000466950 WDR20Q8TBZ3 569 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 METTL6Q8TCB7 284 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 NETO1Q8TDF5 533 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 TWIST2Q8WVJ9 160 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 NCSTNQ92542 709 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 TRAPPC9Q96Q05 1148 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 FRG2BQ96QU4 278 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 KCNA7Q96RP8 456 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 PHOX2BQ99453 314 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 TRIM55Q9BYV6 548 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 RHBGQ9H310 441 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 BRF2Q9HAW0 419 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 PFDN4Q9NQP4 134 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 PSD3Q9NYI0 1048 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 BTRCQ9Y297 605 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 SPTBP11277 2137 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 KIF26BQ2KJY2 2108 aa12.68□□□□□ -0.38
SEC22A-203ENST00000466950 TRPC5OSA6NMA1 111 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 TMEM233B4DJY2 109 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 D6RAR5 112 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 NPIPB8E9PQR5 432 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 H7BY64 318 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 MANBAO00462 879 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 GDF9O60383 454 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 ZBTB11O95625 1053 aaPredicted RBP12.67□□□□□ -0.38
SEC22A-203ENST00000466950 MSL3P1P0C860 447 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 THRAP10827 490 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 CDK4P11802 303 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 DRD4P21917 467 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 YBX1P67809 324 aaKnown RBP12.67□□□□□ -0.38
SEC22A-203ENST00000466950 PHEXP78562 749 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 CCL7P80098 99 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 E2F1Q01094 437 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 CSTF3Q12996 717 aaKnown RBP12.67□□□□□ -0.38
SEC22A-203ENST00000466950 IFT88Q13099 833 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 ZRSR2Q15696 482 aaKnown RBP12.67□□□□□ -0.38
SEC22A-203ENST00000466950 CPSF6Q16630 551 aaKnown RBP eCLIP12.67□□□□□ -0.38
SEC22A-203ENST00000466950 AMZ1Q400G9 498 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 XKR7Q5GH72 579 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 NKAIN2Q5VXU1 208 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 FCRL6Q6DN72 434 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 ADCK2Q7Z695 626 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 TRIM73Q86UV7 250 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 MYLK4Q86YV6 388 aaPredicted RBP12.67□□□□□ -0.38
SEC22A-203ENST00000466950 OR7G3Q8NG95 312 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 TCTN2Q96GX1 697 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 PRAP1Q96NZ9 151 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 TGM7Q96PF1 710 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 MAP3K3Q99759 626 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 NUDT22Q9BRQ3 303 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 SHCBP1LQ9BZQ2 653 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 ZMYND15Q9H091 742 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 SPNS1Q9H2V7 528 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 ELOVL6Q9H5J4 265 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 ENAMQ9NRM1 1142 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 PNPOQ9NVS9 261 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 KLHL14Q9P2G3 628 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 MARCOQ9UEW3 520 aaPredicted RBP12.67□□□□□ -0.38
SEC22A-203ENST00000466950 PILRAQ9UKJ1 303 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 DNAJC15Q9Y5T4 150 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 USH1CQ9Y6N9 552 aa12.67□□□□□ -0.38
SEC22A-203ENST00000466950 CNOT1A5YKK6 2376 aaKnown RBP12.67□□□□□ -0.38
SEC22A-203ENST00000466950 FOXE1O00358 373 aaPredicted RBP12.66□□□□□ -0.38
SEC22A-203ENST00000466950 ZNF195O14628 629 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 HAT1O14929 419 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 ULK1O75385 1050 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 RFPL3O75679 317 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 DKK1O94907 266 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 ST6GAL1P15907 406 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 CSRP1P21291 193 aaKnown RBP12.66□□□□□ -0.38
SEC22A-203ENST00000466950 PPM1FP49593 454 aaPredicted RBP12.66□□□□□ -0.38
SEC22A-203ENST00000466950 SEC24CP53992 1094 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 TRA2AQ13595 282 aaKnown RBP eCLIP12.66□□□□□ -0.38
SEC22A-203ENST00000466950 SPIDRQ14159 915 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 CGB2Q6NT52 195 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 FAM92BQ6ZTR7 304 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 TRIM46Q7Z4K8 759 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 FAM20CQ8IXL6 584 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.66□□□□□ -0.38
SEC22A-203ENST00000466950 GBP7Q8N8V2 638 aaPredicted RBP12.66□□□□□ -0.38
SEC22A-203ENST00000466950 MFSD9Q8NBP5 474 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 AGR3Q8TD06 166 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 KLHL6Q8WZ60 621 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 C19orf60Q96EN9 201 aa12.66□□□□□ -0.38
SEC22A-203ENST00000466950 SLC41A2Q96JW4 573 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms