RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 LCMT2O60294 686 aaKnown RBP13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 DLX3O60479 287 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 PLIN3O60664 434 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 PRAMEF4O60810 478 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 CPNE3O75131 537 aaKnown RBP13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 SPAG7O75391 227 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 DLGAP3O95886 979 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 EIF2S1P05198 315 aaKnown RBP13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 EPB42P16452 691 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 EPORP19235 508 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 VARSP26640 1264 aaKnown RBP13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 BCL6P41182 706 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 NFKB2Q00653 900 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 REEP5Q00765 189 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 IRF8Q02556 426 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 GRM7Q14831 915 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 TNFAIP8L3Q5GJ75 292 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 PRAMEF9Q5VWM5 478 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 ATG9BQ674R7 924 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 SLC22A9Q8IVM8 553 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 TBC1D19Q8N5T2 526 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 CCDC63Q8NA47 563 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 MFSD9Q8NBP5 474 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 ZNF248Q8NDW4 579 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 CLIP3Q96DZ5 547 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 PGM2Q96G03 612 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 SARGQ9BW04 601 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 IQCGQ9H095 443 aaKnown RBP13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 SPNS1Q9H2V7 528 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 EHD1Q9H4M9 534 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 ACTR5Q9H9F9 607 aaPredicted RBP13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 ENAMQ9NRM1 1142 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 STARD5Q9NSY2 213 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 PLLPQ9Y342 182 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 PCDHGA4Q9Y5G9 962 aa13.82□□□□□ -0.2
DNMT3A-208ENST00000466601 TEX51A0A1B0GUA7 166 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 FITM1A5D6W6 292 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 OR1F1O43749 312 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 RAD1O60671 282 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 KATNA1O75449 491 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 HBQ1P09105 142 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 MYZAPP0CAP1 466 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 MYL2P10916 166 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 LIPCP11150 499 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 CREB1P16220 341 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 CXCR2P25025 360 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 PIK3CGP48736 1102 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 PCDH1Q08174 1060 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 CHIT1Q13231 466 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 GTF2H2Q13888 395 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 DOC2AQ14183 400 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 MAP7Q14244 749 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 RBBP5Q15291 538 aaKnown RBP13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 PRTGQ2VWP7 1150 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 XKR6Q5GH73 641 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 GTF2H2CQ6P1K8 395 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 C6orf15Q6UXA7 325 aaPredicted RBP13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 ZYG11AQ6WRX3 759 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 HDXQ7Z353 690 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 TIPARPQ7Z3E1 657 aaKnown RBP13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 GOLGA7Q7Z5G4 137 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 EXOC3L1Q86VI1 746 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 DTX1Q86Y01 620 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 NLGN4XQ8N0W4 816 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 KRT78Q8N1N4 520 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 CSNK1A1LQ8N752 337 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 TTC29Q8NA56 475 aaPredicted RBP13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 KDF1Q8NAX2 398 aaPredicted RBP13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 SLC38A9Q8NBW4 561 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 GALNT6Q8NCL4 622 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 ZNF740Q8NDX6 193 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 NLGN4YQ8NFZ3 816 aaPredicted RBP13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 RDH11Q8TC12 318 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 WDR34Q96EX3 536 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 PTCD3Q96EY7 689 aaKnown RBP13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 NAF1Q96HR8 494 aaKnown RBP13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 NDC1Q9BTX1 674 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 GEMIN8Q9NWZ8 242 aaKnown RBP13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 PCTPQ9UKL6 214 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 SRPK3Q9UPE1 567 aa13.81□□□□□ -0.2
DNMT3A-208ENST00000466601 HYKKA2RU49 373 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 GOLGA6L10A6NI86 522 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 G3V2L1 256 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 TAF4O00268 1085 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 TXNDC9O14530 226 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 RPS17P08708 135 aaKnown RBP13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 CCNYL3P0C7X3 344 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 CPA3P15088 417 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 CASP2P42575 452 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 GCGRP47871 477 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 SCTRP47872 440 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 PRKAA2P54646 552 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 ARSFP54793 590 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 HERVK_113P63132 956 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 LAPTM5Q13571 262 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 SLBPQ14493 270 aaKnown RBP eCLIP13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 TGIF1Q15583 401 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 TBCCQ15814 346 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 FAM214AQ32MH5 1076 aa13.8□□□□□ -0.2
DNMT3A-208ENST00000466601 ZNF678Q5SXM1 525 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms