RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 PGM3O95394 542 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 MLYCDO95822 493 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 CSF2P04141 144 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 EPB42P16452 691 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 AVPR2P30518 371 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 MAPK9P45984 424 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 NR1H2P55055 460 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 GRIK2Q13002 908 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 C6orf52Q5T4I8 152 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 LYSMD4Q5XG99 296 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 SCIMPQ6UWF3 145 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 IQCHQ86VS3 1027 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 THOC6Q86W42 341 aaKnown RBP17.96■□□□□ 0.47
CAPN3-209ENST00000466222 AQP12AQ8IXF9 295 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 LRRC56Q8IYG6 542 aaPredicted RBP17.96■□□□□ 0.47
CAPN3-209ENST00000466222 TBC1D21Q8IYX1 336 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 MINDY1Q8N5J2 469 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 PACRGLQ8N7B6 248 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 SNX31Q8N9S9 440 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 RAD51AP1Q96B01 352 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 MUC13Q9H3R2 512 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 AKTIPQ9H8T0 292 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 GID8Q9NWU2 228 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 SH2B3Q9UQQ2 575 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 BTRCQ9Y297 605 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 RNF11Q9Y3C5 154 aa17.96■□□□□ 0.47
CAPN3-209ENST00000466222 KNL1Q8NG31 2342 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 ARHGAP10A1A4S6 786 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 DYTNA2CJ06 578 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 ESRRBO95718 433 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 ALDOCP09972 364 aaKnown RBP17.95■□□□□ 0.46
CAPN3-209ENST00000466222 LBPP18428 481 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 SLC19A1P41440 591 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 AFF3P51826 1226 aaKnown RBP17.95■□□□□ 0.46
CAPN3-209ENST00000466222 SLC7A2P52569 658 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 ATXN3P54252 364 aaPredicted RBP17.95■□□□□ 0.46
CAPN3-209ENST00000466222 PNLIPRP1P54315 467 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 TBPL1P62380 186 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 KRT33BQ14525 404 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 KIF19Q2TAC6 998 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 TTC23LQ6PF05 361 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 GPRIN3Q6ZVF9 776 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 FUNDC1Q8IVP5 155 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 TCAIMQ8N3R3 496 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 LINC01555Q8NAE3 123 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 TWIST2Q8WVJ9 160 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 CAMK1GQ96NX5 476 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 HBEGFQ99075 208 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 ACAT2Q9BWD1 397 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 TUBB1Q9H4B7 451 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 C8orf4Q9NR00 106 aa17.95■□□□□ 0.46
CAPN3-209ENST00000466222 MTHFD1P11586 935 aaKnown RBP17.94■□□□□ 0.46
CAPN3-209ENST00000466222 BMP2P12643 396 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 HSD17B1P14061 328 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 OR56A3Q8NH54 315 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 FAM174AQ8TBP5 190 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 LRTOMTQ8WZ04 291 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 SLCO4A1Q96BD0 722 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 C3orf30Q96M34 536 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 ZNF382Q96SR6 550 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 NUSAP1Q9BXS6 441 aaKnown RBP17.94■□□□□ 0.46
CAPN3-209ENST00000466222 COQ10BQ9H8M1 238 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 PFDN4Q9NQP4 134 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 PCOLCE2Q9UKZ9 415 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 ATP6AP2A0A1C7CYW4 349 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 FFAR3O14843 346 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 VILLO15195 856 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 GPR42O15529 346 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 ATP6AP2O75787 350 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 F3P13726 295 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 IDO1P14902 403 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 NME1P15531 152 aaKnown RBP17.94■□□□□ 0.46
CAPN3-209ENST00000466222 HALP42357 657 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 BNC1Q01954 994 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 LPAL2Q16609 132 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 OGFOD2Q6N063 350 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 IYDQ6PHW0 289 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 B3GNT6Q6ZMB0 384 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 LRRC70Q7Z2Q7 622 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 SPATA19Q7Z5L4 167 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 MILR1Q7Z6M3 343 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 DCP2Q8IU60 420 aaKnown RBP17.94■□□□□ 0.46
CAPN3-209ENST00000466222 OR52E1Q8NGJ3 308 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 ATL1Q8WXF7 558 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 PRPF18Q99633 342 aaKnown RBP17.94■□□□□ 0.46
CAPN3-209ENST00000466222 DNAJC11Q9NVH1 559 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 TMEM45AQ9NWC5 275 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 UCKL1Q9NWZ5 548 aa17.94■□□□□ 0.46
CAPN3-209ENST00000466222 E7EQ34 232 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 ANGPT2O15123 496 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 HNRNPRO43390 633 aaKnown RBP17.93■□□□□ 0.46
CAPN3-209ENST00000466222 CAPN1P07384 714 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 NPPBP16860 134 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 PSMB5P28074 263 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 HTR6P50406 440 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 C21orf59P57076 290 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 NADK2Q4G0N4 442 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 WASH2PQ6VEQ5 465 aa17.93■□□□□ 0.46
CAPN3-209ENST00000466222 RBM44Q6ZP01 1051 aaKnown RBP17.93■□□□□ 0.46
CAPN3-209ENST00000466222 ERMP1Q7Z2K6 904 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms