RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CDH16O75309 829 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 RBP1P09455 135 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 BCL6P41182 706 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 ARSFP54793 590 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 EMP3P54852 163 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 TMPRSS3P57727 454 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 CDC16Q13042 620 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 FBXO48Q5FWF7 155 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 LCN10Q6JVE6 187 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 FAM198BQ6UWH4 519 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 SH2D5Q6ZV89 423 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 CYP4X1Q8N118 509 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 TMEM151AQ8N4L1 468 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 CT55Q8WUE5 264 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 ESAMQ96AP7 390 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 NDC1Q9BTX1 674 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 CD244Q9BZW8 370 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 FAM117AQ9C073 453 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 SPNS1Q9H2V7 528 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 STARD5Q9NSY2 213 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 DNAJC11Q9NVH1 559 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 XPR1Q9UBH6 696 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 DHCR7Q9UBM7 475 aaKnown RBP19.41■□□□□ 0.7
SKA3-205ENST00000465471 PCDHGA6Q9Y5G7 932 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 PCDHGA4Q9Y5G9 962 aa19.41■□□□□ 0.7
SKA3-205ENST00000465471 TRBC2A0A5B9 178 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 C21orf140B9A014 251 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 K7ENP7 123 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 P2RX6O15547 441 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 MED26O95402 600 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 ONECUT2O95948 504 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 KLK3P07288 261 aaPredicted RBP19.4■□□□□ 0.7
SKA3-205ENST00000465471 CAPN1P07384 714 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 SBK3P0C264 359 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 EPORP19235 508 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 ITGAXP20702 1163 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 F8A1P23610 371 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 SLCO1A2P46721 670 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 REEP5Q00765 189 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 E2F2Q14209 437 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 SETDB1Q15047 1291 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 FAM199XQ6PEV8 388 aaPredicted RBP19.4■□□□□ 0.7
SKA3-205ENST00000465471 INO80CQ6PI98 192 aaPredicted RBP19.4■□□□□ 0.7
SKA3-205ENST00000465471 NXPE4Q6UWF7 544 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 CCDC81Q6ZN84 652 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 SLCO4C1Q6ZQN7 724 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 LRRC70Q7Z2Q7 622 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 CSNK1A1LQ8N752 337 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 TTC29Q8NA56 475 aaPredicted RBP19.4■□□□□ 0.7
SKA3-205ENST00000465471 OR2W6PQ8NHA6 318 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 KIAA1143Q96AT1 154 aaPredicted RBP19.4■□□□□ 0.7
SKA3-205ENST00000465471 TM4SF19Q96DZ7 209 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 CRELD1Q96HD1 420 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 SLC45A3Q96JT2 553 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 C10orf90Q96M02 699 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 EFHD1Q9BUP0 239 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 CAPS2Q9BXY5 557 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 CHST8Q9H2A9 424 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 PRORYQ9H606 182 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 GPN2Q9H9Y4 310 aaPredicted RBP19.4■□□□□ 0.7
SKA3-205ENST00000465471 CPNE5Q9HCH3 593 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 CUTCQ9NTM9 273 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 IRAK4Q9NWZ3 460 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 LOC400499M0QZD8 3231 aa19.4■□□□□ 0.7
SKA3-205ENST00000465471 CACNA1BQ00975 2339 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 A0A1B0GX78 115 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 FEZF1A0PJY2 475 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 DSCR3O14972 297 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 LCMT2O60294 686 aaKnown RBP19.39■□□□□ 0.69
SKA3-205ENST00000465471 PRAMEF4O60810 478 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 GNAZP19086 355 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 GRK3P35626 688 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 DLSTP36957 453 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 AGTR2P50052 363 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 ALDH18A1P54886 795 aaKnown RBP19.39■□□□□ 0.69
SKA3-205ENST00000465471 MEF2AQ02078 507 aaPredicted RBP19.39■□□□□ 0.69
SKA3-205ENST00000465471 PCDH1Q08174 1060 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 DNASE1L3Q13609 305 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 HKDC1Q2TB90 917 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 FAM214AQ32MH5 1076 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 PRAMEF9Q5VWM5 478 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 ATG9BQ674R7 924 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 TMPRSS11BQ86T26 416 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 MFSD9Q8NBP5 474 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 ZNF740Q8NDX6 193 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 MR1Q95460 341 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 RERGQ96A58 199 aaPredicted RBP19.39■□□□□ 0.69
SKA3-205ENST00000465471 WDR34Q96EX3 536 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 MRPL57Q9BQC6 102 aaKnown RBP19.39■□□□□ 0.69
SKA3-205ENST00000465471 SLC7A5P2Q9GIP4 190 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 MRPL46Q9H2W6 279 aaKnown RBP19.39■□□□□ 0.69
SKA3-205ENST00000465471 EHD1Q9H4M9 534 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 COPG2Q9UBF2 871 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 IL17BQ9UHF5 180 aa19.39■□□□□ 0.69
SKA3-205ENST00000465471 RUVBL1Q9Y265 456 aaKnown RBP19.39■□□□□ 0.69
SKA3-205ENST00000465471 A0A1W2PPM1 405 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 HYKKA2RU49 373 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 TK2O00142 265 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 TXNDC9O14530 226 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 EIF2S1P05198 315 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms