RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 UBTD2Q8WUN7 234 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 RSC1A1Q92681 617 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 ZUFSPQ96AP4 578 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 MAGEB10Q96LZ2 347 aaPredicted RBP16.76■□□□□ 0.27
CPSF4-209ENST00000465132 TGM7Q96PF1 710 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 MENTQ9BUN1 341 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 ULBP3Q9BZM4 244 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 ZNF768Q9H5H4 540 aaKnown RBP16.76■□□□□ 0.27
CPSF4-209ENST00000465132 KCNK9Q9NPC2 374 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 MED4Q9NPJ6 270 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 NKIRAS1Q9NYS0 192 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 TMEM216Q9P0N5 145 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 ANKMY1Q9P2S6 941 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 OPTCQ9UBM4 332 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 PTBP2Q9UKA9 531 aaKnown RBP16.76■□□□□ 0.27
CPSF4-209ENST00000465132 POMT2Q9UKY4 750 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 SNX7Q9UNH6 387 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 STK38LQ9Y2H1 464 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 ANGPTL3Q9Y5C1 460 aa16.76■□□□□ 0.27
CPSF4-209ENST00000465132 MRPS18BQ9Y676 258 aaKnown RBP16.76■□□□□ 0.27
CPSF4-209ENST00000465132 A0A0J9YY10 115 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 TARM1B6A8C7 271 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 UBXN8O00124 270 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 BTN3A3O00478 584 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 KLK8O60259 260 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 PLIN3O60664 434 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 CPA3P15088 417 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 ZNF28P17035 718 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 PRDX3P30048 256 aaKnown RBP16.75■□□□□ 0.27
CPSF4-209ENST00000465132 TBPL1P62380 186 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 SH3BP2P78314 561 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 SETDB1Q15047 1291 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 PFKFB4Q16877 469 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 LCTLQ6UWM7 567 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 C6orf15Q6UXA7 325 aaPredicted RBP16.75■□□□□ 0.27
CPSF4-209ENST00000465132 PRSS42Q7Z5A4 293 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 C17orf64Q86WR6 236 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 KLHDC8AQ8IYD2 350 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 LMNTD1Q8N9Z9 388 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 DENND1AQ8TEH3 1009 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 RNF31Q96EP0 1072 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 IL17FQ96PD4 163 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 SH3GL2Q99962 352 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 SGPP1Q9BX95 441 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 CD244Q9BZW8 370 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 ATG10Q9H0Y0 220 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 ZNF358Q9NW07 568 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 GPRC5BQ9NZH0 403 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 IKZF3Q9UKT9 509 aa16.75■□□□□ 0.27
CPSF4-209ENST00000465132 AGPSO00116 658 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 CLGNO14967 610 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 ZBTB11O95625 1053 aaPredicted RBP16.74■□□□□ 0.27
CPSF4-209ENST00000465132 EPB42P16452 691 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 UGT2B7P16662 529 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 GNAZP19086 355 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 GRK3P35626 688 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 DLSTP36957 453 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 SEPHS1P49903 392 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 MAGOHP61326 146 aaKnown RBP16.74■□□□□ 0.27
CPSF4-209ENST00000465132 PRDX1Q06830 199 aaKnown RBP16.74■□□□□ 0.27
CPSF4-209ENST00000465132 UBAP2LQ14157 1087 aaKnown RBP16.74■□□□□ 0.27
CPSF4-209ENST00000465132 IL11RAQ14626 422 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 PCBP2Q15366 365 aaKnown RBP eCLIP16.74■□□□□ 0.27
CPSF4-209ENST00000465132 PTCHD3Q3KNS1 767 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 LACTB2Q53H82 288 aaPredicted RBP16.74■□□□□ 0.27
CPSF4-209ENST00000465132 CACHD1Q5VU97 1274 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 LINC01555Q8NAE3 123 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 GALNT6Q8NCL4 622 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 TCP10LQ8TDR4 215 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 PPP4R1Q8TF05 950 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 TLCD1Q96CP7 247 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 OR6C1Q96RD1 312 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 TWSG1Q9GZX9 223 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 MRPS30Q9NP92 439 aaKnown RBP16.74■□□□□ 0.27
CPSF4-209ENST00000465132 DNAJC11Q9NVH1 559 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 CIDEBQ9UHD4 219 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 CROTQ9UKG9 612 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 KCNMB2Q9Y691 235 aa16.74■□□□□ 0.27
CPSF4-209ENST00000465132 H3BQF6 201 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 K7EPI3 171 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 KIF1CO43896 1103 aaKnown RBP16.73■□□□□ 0.27
CPSF4-209ENST00000465132 TYROBPO43914 113 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 H2AFYO75367 372 aaKnown RBP16.73■□□□□ 0.27
CPSF4-209ENST00000465132 SPAG7O75391 227 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 KIAA0754O94854 1291 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 WDR47O94967 919 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 PROCP04070 461 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 CXCR2P25025 360 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 SLC6A12P48065 614 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 PDK4Q16654 411 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 ICE2Q659A1 982 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 ZYG11AQ6WRX3 759 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 THOC6Q86W42 341 aaKnown RBP16.73■□□□□ 0.27
CPSF4-209ENST00000465132 PTGR2Q8N8N7 351 aaPredicted RBP16.73■□□□□ 0.27
CPSF4-209ENST00000465132 TCTN2Q96GX1 697 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 OR2A14Q96R47 310 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 PITPNM3Q9BZ71 974 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 CHRNA10Q9GZZ6 450 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 TAC3Q9UHF0 121 aa16.73■□□□□ 0.27
CPSF4-209ENST00000465132 PCDHB3Q9Y5E6 796 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms