RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 PROKR1Q8TCW9 393 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 MZB1Q8WU39 189 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 THAP11Q96EK4 314 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 SCYL1Q96KG9 808 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 DPH2Q9BQC3 489 aaPredicted RBP13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 CAPS2Q9BXY5 557 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 CD244Q9BZW8 370 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 SYNPO2LQ9H987 977 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 CPNE5Q9HCH3 593 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 DHCR7Q9UBM7 475 aaKnown RBP13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 CROTQ9UKG9 612 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 PTPRQQ9UMZ3 2332 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 HYKKA2RU49 373 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 SMIM23A6NLE4 172 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 C21orf140B9A014 251 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 TXNDC9O14530 226 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 LCMT2O60294 686 aaKnown RBP13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 GFAPP14136 432 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 GNAZP19086 355 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 AGXTP21549 392 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 F8A1P23610 371 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 GCGRP47871 477 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 CXADRP78310 365 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 DCDP81605 110 aaKnown RBP13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 MEF2AQ02078 507 aaPredicted RBP13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 VAC14Q08AM6 782 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 CDC16Q13042 620 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 COL9A2Q14055 689 aaPredicted RBP13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 RASA2Q15283 850 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 PFKFB4Q16877 469 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 COL28A1Q2UY09 1125 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 C1orf189Q5VU69 101 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 ZNF385CQ66K41 422 aaPredicted RBP13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 LCN10Q6JVE6 187 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 TTLL10Q6ZVT0 673 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 MREGQ8N565 214 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 TBC1D19Q8N5T2 526 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 CSNK1A1LQ8N752 337 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 ZSCAN1Q8NBB4 408 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 OR2W6PQ8NHA6 318 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 ACMSDQ8TDX5 336 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 EPS8L3Q8TE67 593 aaKnown RBP13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 CT55Q8WUE5 264 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 GBP5Q96PP8 586 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 CHST8Q9H2A9 424 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 PELI2Q9HAT8 420 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 CUTCQ9NTM9 273 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 DNAJC11Q9NVH1 559 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 GPRC5BQ9NZH0 403 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 KCND3Q9UK17 655 aa13.86□□□□□ -0.19
SQSTM1-205ENST00000464493 ITPR1Q14643 2758 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 CACNA1BQ00975 2339 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 A0A1W2PPM1 405 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 TLDC2A0PJX2 215 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 GOLGA8RI6L899 631 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 K7ENP7 123 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 TERTO14746 1132 aaKnown RBP13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 DSCR3O14972 297 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 OR1F1O43749 312 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 KLK8O60259 260 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 CCNT2O60583 730 aaKnown RBP13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 CDH16O75309 829 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 H2AFYO75367 372 aaKnown RBP13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 KATNA1O75449 491 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 C1GALT1C1LP0DN25 315 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 PYGBP11216 843 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 KRT15P19012 456 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 WT1P19544 449 aaPredicted RBP13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 BCL6P41182 706 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 AGTR2P50052 363 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 EMP3P54852 163 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 ALDH18A1P54886 795 aaKnown RBP13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 IFFO1Q0D2I5 559 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 DNASE1L3Q13609 305 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 HKDC1Q2TB90 917 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 PRTGQ2VWP7 1150 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 ARHGAP40Q5TG30 622 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 INO80CQ6PI98 192 aaPredicted RBP13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 LRRC70Q7Z2Q7 622 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 TMPRSS11BQ86T26 416 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 LCA5Q86VQ0 697 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 CYP4X1Q8N118 509 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 SNX31Q8N9S9 440 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 MFSD9Q8NBP5 474 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 UBTD2Q8WUN7 234 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 CRELD1Q96HD1 420 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 SLC45A3Q96JT2 553 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 MRPL57Q9BQC6 102 aaKnown RBP13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 AIF1LQ9BQI0 150 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 SARGQ9BW04 601 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 GPR87Q9BY21 358 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 NLNQ9BYT8 704 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 CPSF2Q9P2I0 782 aaKnown RBP13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 XPR1Q9UBH6 696 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 NDOR1Q9UHB4 597 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 IL17BQ9UHF5 180 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 RUVBL1Q9Y265 456 aaKnown RBP13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 ASB1Q9Y576 335 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 PCDHGA4Q9Y5G9 962 aa13.85□□□□□ -0.19
SQSTM1-205ENST00000464493 A0A1B0GX78 115 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms