RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 PALM2Q8IXS6 379 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 KBTBD2Q8IY47 623 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 GABPB2Q8TAK5 448 aaPredicted RBP17.91■□□□□ 0.46
SF3A1-205ENST00000463818 LMF1Q96S06 567 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 BARD1Q99728 777 aaKnown RBP17.91■□□□□ 0.46
SF3A1-205ENST00000463818 TGIF2Q9GZN2 237 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 DRC3Q9H069 523 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 EPS8L2Q9H6S3 715 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 MKKSQ9NPJ1 570 aaPredicted RBP17.91■□□□□ 0.46
SF3A1-205ENST00000463818 CCDC177Q9NQR7 707 aaPredicted RBP17.91■□□□□ 0.46
SF3A1-205ENST00000463818 C14orf105Q9NVL8 296 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 TAS2R13Q9NYV9 303 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 NOVA2Q9UNW9 492 aaKnown RBP17.91■□□□□ 0.46
SF3A1-205ENST00000463818 PRRC2CQ9Y520 2896 aaKnown RBP17.91■□□□□ 0.46
SF3A1-205ENST00000463818 NSG1A0A0A6YYJ2 146 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 C8GP07360 202 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 COX6A1P12074 109 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 IVDP26440 423 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 CDKN2DP55273 166 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 SNRPNP63162 240 aaKnown RBP17.9■□□□□ 0.46
SF3A1-205ENST00000463818 FAM53BQ14153 422 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 NDUFA9Q16795 377 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 RBM20Q5T481 1227 aaKnown RBP17.9■□□□□ 0.46
SF3A1-205ENST00000463818 LRRC8EQ6NSJ5 796 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 SLCO2A1Q92959 643 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 CNDP1Q96KN2 507 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 NAT9Q9BTE0 207 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 PCBD2Q9H0N5 130 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 ATG10Q9H0Y0 220 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 PARVBQ9HBI1 364 aa17.9■□□□□ 0.46
SF3A1-205ENST00000463818 MRPS2Q9Y399 296 aaKnown RBP17.9■□□□□ 0.46
SF3A1-205ENST00000463818 KCNE1BA0A087WTH5 132 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 ANKUB1A6NFN9 424 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 SLC16A5O15375 505 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 RNF224P0DH78 156 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 TCP1P17987 556 aaKnown RBP17.89■□□□□ 0.45
SF3A1-205ENST00000463818 AVPR1BP47901 424 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 TBPL1P62380 186 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 MAT1AQ00266 395 aaKnown RBP17.89■□□□□ 0.45
SF3A1-205ENST00000463818 EEF1A2Q05639 463 aaKnown RBP17.89■□□□□ 0.45
SF3A1-205ENST00000463818 MFAP5Q13361 173 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 NAE1Q13564 534 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 AGTRAPQ6RW13 159 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 MBOAT1Q6ZNC8 495 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 VN1R4Q7Z5H5 301 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 CNTN4Q8IWV2 1026 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 MYO1HQ8N1T3 1032 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 CATSPER1Q8NEC5 780 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 ALKBH8Q96BT7 664 aaKnown RBP17.89■□□□□ 0.45
SF3A1-205ENST00000463818 MACROD1Q9BQ69 325 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 PLEKHB1Q9UF11 243 aaPredicted RBP17.89■□□□□ 0.45
SF3A1-205ENST00000463818 CNTRLQ7Z7A1 2325 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 PCM1Q15154 2024 aa17.89■□□□□ 0.45
SF3A1-205ENST00000463818 DDAH2O95865 285 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 PRR35P0CG20 571 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 TSFMP43897 325 aaKnown RBP17.88■□□□□ 0.45
SF3A1-205ENST00000463818 RPS15AP62244 130 aaKnown RBP17.88■□□□□ 0.45
SF3A1-205ENST00000463818 CSNK1G2P78368 415 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 ELOAQ14241 798 aaKnown RBP17.88■□□□□ 0.45
SF3A1-205ENST00000463818 ZNF169Q14929 603 aaPredicted RBP17.88■□□□□ 0.45
SF3A1-205ENST00000463818 TLR1Q15399 786 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 C4orf17Q53FE4 359 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 HP1BP3Q5SSJ5 553 aaPredicted RBP17.88■□□□□ 0.45
SF3A1-205ENST00000463818 HIST2H2BCQ6DN03 193 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 KIAA0408Q6ZU52 694 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 C17orf64Q86WR6 236 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 ZC3H7AQ8IWR0 971 aaKnown RBP17.88■□□□□ 0.45
SF3A1-205ENST00000463818 OR9A4Q8NGU2 314 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 PSMF1Q92530 271 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 THAP11Q96EK4 314 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 LINGO1Q96FE5 620 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 CERS2Q96G23 380 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 PWWP2AQ96N64 755 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 PLAC1Q9HBJ0 212 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 PPANQ9NQ55 473 aaKnown RBP17.88■□□□□ 0.45
SF3A1-205ENST00000463818 AGPAT4Q9NRZ5 378 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 SLC17A6Q9P2U8 582 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 MKL2Q9ULH7 1088 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 SH2B3Q9UQQ2 575 aa17.88■□□□□ 0.45
SF3A1-205ENST00000463818 SPTAN1Q13813 2472 aaKnown RBP17.88■□□□□ 0.45
SF3A1-205ENST00000463818 IGHV1-45A0A0A0MS14 117 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 A0A1W2PQ72 361 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 LCMT2O60294 686 aaKnown RBP17.87■□□□□ 0.45
SF3A1-205ENST00000463818 SERPINA7P05543 415 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 HIST1H2AGP0C0S8 130 aaPredicted RBP17.87■□□□□ 0.45
SF3A1-205ENST00000463818 HIST1H2ADP20671 130 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 ELK3P41970 407 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 CDC16Q13042 620 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 SP140Q13342 867 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 PHKG1Q16816 387 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 TEDDM1Q5T9Z0 273 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 TMEM205Q6UW68 189 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 KLHL7Q8IXQ5 586 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 PDIK1LQ8N165 341 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 BRIX1Q8TDN6 353 aaKnown RBP17.87■□□□□ 0.45
SF3A1-205ENST00000463818 CFAP36Q96G28 342 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 HIST1H2AHQ96KK5 128 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 CAPZA3Q96KX2 299 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 HIST1H2AJQ99878 128 aa17.87■□□□□ 0.45
SF3A1-205ENST00000463818 H2AFJQ9BTM1 129 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms