RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 ANKRD2Q9GZV1 360 aa3.12□□□□□ -1.91
KDM3A-208ENST00000463013 HOXD1Q9GZZ0 328 aa3.12□□□□□ -1.91
KDM3A-208ENST00000463013 FZD8Q9H461 694 aa3.12□□□□□ -1.91
KDM3A-208ENST00000463013 ACTL8Q9H568 366 aa3.12□□□□□ -1.91
KDM3A-208ENST00000463013 RABEP2Q9H5N1 569 aa3.12□□□□□ -1.91
KDM3A-208ENST00000463013 XAB2Q9HCS7 855 aaKnown RBP3.12□□□□□ -1.91
KDM3A-208ENST00000463013 NDE1Q9NXR1 346 aa3.12□□□□□ -1.91
KDM3A-208ENST00000463013 ELF5Q9UKW6 265 aaPredicted RBP3.12□□□□□ -1.91
KDM3A-208ENST00000463013 MOB4Q9Y3A3 225 aa3.12□□□□□ -1.91
KDM3A-208ENST00000463013 TDRD15B5MCY1 1934 aaKnown RBP3.12□□□□□ -1.91
KDM3A-208ENST00000463013 IGHV3OR16-10A0A075B7F0 116 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 TRBV4-1A0A0J9YWV2 114 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 FIBPO43427 364 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 TBX10O75333 385 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 MYL6BP14649 208 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 GATA1P15976 413 aaPredicted RBP3.11□□□□□ -1.91
KDM3A-208ENST00000463013 RBMS1P29558 406 aaKnown RBP3.11□□□□□ -1.91
KDM3A-208ENST00000463013 ALDH1B1P30837 517 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 HSPA4P34932 840 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 KRT20P35900 424 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 CETN2P41208 172 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 SLC8A3P57103 927 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 IRX6P78412 446 aaPredicted RBP3.11□□□□□ -1.91
KDM3A-208ENST00000463013 IRX4P78413 519 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 NUCB1Q02818 461 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 SRSF9Q13242 221 aaKnown RBP eCLIP3.11□□□□□ -1.91
KDM3A-208ENST00000463013 LY6DQ14210 128 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 COG2Q14746 738 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 PTGISQ16647 500 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 LACTB2Q53H82 288 aaPredicted RBP3.11□□□□□ -1.91
KDM3A-208ENST00000463013 KRBOX4Q5JUW0 171 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 CHST3Q7LGC8 479 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 RCOR2Q8IZ40 523 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 GPC2Q8N158 579 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 MRPS27Q92552 414 aaKnown RBP3.11□□□□□ -1.91
KDM3A-208ENST00000463013 C2orf48Q96LS8 159 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 SPATA33Q96N06 139 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 OVOL2Q9BRP0 275 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 SDCBP2Q9H190 292 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 TMX4Q9H1E5 349 aaPredicted RBP3.11□□□□□ -1.91
KDM3A-208ENST00000463013 FN3KQ9H479 309 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 POLLQ9UGP5 575 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 WIPI2Q9Y4P8 454 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 CCL27Q9Y4X3 112 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 SELENOKQ9Y6D0 94 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 SMAD5-AS1Q9Y6J3 95 aa3.11□□□□□ -1.91
KDM3A-208ENST00000463013 LOC105371242A0A075B767 164 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 PI4K2BG5E9Z4 385 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 SERPING1P05155 500 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 ACAT1P24752 427 aaKnown RBP3.1□□□□□ -1.91
KDM3A-208ENST00000463013 SHC1P29353 583 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 DCDC1P59894 354 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 MS4A2Q01362 244 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 TRA2AQ13595 282 aaKnown RBP eCLIP3.1□□□□□ -1.91
KDM3A-208ENST00000463013 RAPSNQ13702 412 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 ENPP7Q6UWV6 458 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 SLC24A5Q71RS6 500 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 CHMP1BQ7LBR1 199 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 ZER1Q7Z7L7 766 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 LRTM2Q8N967 370 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 AQP11Q8NBQ7 271 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 C9orf43Q8TAL5 461 aaPredicted RBP3.1□□□□□ -1.91
KDM3A-208ENST00000463013 SEPT1Q8WYJ6 367 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 VPS33AQ96AX1 596 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 PGM2Q96G03 612 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 RMDN2Q96LZ7 410 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 AGAP4Q96P64 663 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 BTBD9Q96Q07 612 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 NAA11Q9BSU3 229 aaPredicted RBP3.1□□□□□ -1.91
KDM3A-208ENST00000463013 ST6GALNAC4Q9H4F1 302 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 EGLN3Q9H6Z9 239 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 MTHFD2LQ9H903 347 aaPredicted RBP3.1□□□□□ -1.91
KDM3A-208ENST00000463013 RAVER2Q9HCJ3 691 aaKnown RBP3.1□□□□□ -1.91
KDM3A-208ENST00000463013 B3GAT2Q9NPZ5 323 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 MUTYHQ9UIF7 546 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 PA2G4Q9UQ80 394 aaKnown RBP3.1□□□□□ -1.91
KDM3A-208ENST00000463013 LIPGQ9Y5X9 500 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 IL16Q14005 1332 aa3.1□□□□□ -1.91
KDM3A-208ENST00000463013 C17orf105B2RV13 164 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 PLOD3O60568 738 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 RECQL5O94762 991 aaPredicted RBP3.09□□□□□ -1.91
KDM3A-208ENST00000463013 CCDC175P0C221 793 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 ACADSP16219 412 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 AZU1P20160 251 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 CDC25CP30307 473 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 TLX1P31314 330 aaPredicted RBP3.09□□□□□ -1.91
KDM3A-208ENST00000463013 RAD23AP54725 363 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 CACNG1Q06432 222 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 MZT1Q08AG7 82 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 CAMK2DQ13557 499 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 RBBP7Q16576 425 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 HYAL4Q2M3T9 481 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 SUSD4Q5VX71 490 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 ZNF343Q6P1L6 599 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 PPP1R21Q6ZMI0 780 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 GPRIN3Q6ZVF9 776 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 CCDC60Q8IWA6 550 aaPredicted RBP3.09□□□□□ -1.91
KDM3A-208ENST00000463013 OR8H2Q8N162 312 aa3.09□□□□□ -1.91
KDM3A-208ENST00000463013 CCDC191Q8NCU4 936 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms