RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	PTPN4	P29074	926 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	OTX2	P32243	289 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	OR1D4	P47884	311 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	HSPA7	P48741	367 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	RPS15A	P62244	130 aa	Known RBP	9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	CSNK1G2	P78368	415 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	CDKL1	Q00532	357 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	SLC29A2	Q14542	456 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	NCF4	Q15080	339 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	RBBP5	Q15291	538 aa	Known RBP	9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	TGFBI	Q15582	683 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	FAM83E	Q2M2I3	478 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	ZXDC	Q2QGD7	858 aa	Predicted RBP	9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	CATSPERE	Q5SY80	951 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	FAM198B	Q6UWH4	519 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	TMPRSS11B	Q86T26	416 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	PRSS58	Q8IYP2	241 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	DTWD1	Q8N5C7	304 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	ZCCHC10	Q8TBK6	192 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	STAG3L4	Q8TBR4	150 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	PROKR1	Q8TCW9	393 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	DCAKD	Q8WVC6	231 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	SLC5A11	Q8WWX8	675 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	NEIL2	Q969S2	332 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	KIAA1191	Q96A73	305 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	ESAM	Q96AP7	390 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	LRFN5	Q96NI6	719 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	GBP5	Q96PP8	586 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	OR4K3	Q96R72	315 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	UBL7	Q96S82	380 aa	Predicted RBP	9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	DPH2	Q9BQC3	489 aa	Predicted RBP	9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	CCDC77	Q9BR77	488 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	GPR87	Q9BY21	358 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	CNOT10	Q9H9A5	744 aa	Known RBP	9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	IGSF5	Q9NSI5	407 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	CPSF2	Q9P2I0	782 aa	Known RBP	9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	SLC22A14	Q9Y267	594 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	PADI2	Q9Y2J8	665 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	PTRH2	Q9Y3E5	179 aa	Known RBP	9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	KLK4	Q9Y5K2	254 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	KCNE2	Q9Y6J6	123 aa		9.18	□□□□□ -0.94
PSMD4-208	ENST00000462970	LAMA5	O15230	3695 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	HMX2	A2RU54	273 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970		H3BMH7	237 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	FFAR3	O14843	346 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	GPR42	O15529	346 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	P2RX6	O15547	441 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	H2AFY	O75367	372 aa	Known RBP	9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	ALDOA	P04075	364 aa	Known RBP	9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	PRB1	P04280	392 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	ABHD2	P08910	425 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	PIM1	P11309	404 aa	Predicted RBP	9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	GFAP	P14136	432 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	FBL	P22087	321 aa	Known RBP	9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	CNTF	P26441	200 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	VARS	P26640	1264 aa	Known RBP	9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	DEK	P35659	375 aa	Known RBP	9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	BCL6	P41182	706 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	FOLR3	P41439	243 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	HNMT	P50135	292 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	FOXL2	P58012	376 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	IL10RA	Q13651	578 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	TBR1	Q16650	682 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	MUM1	Q2TAK8	710 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	LGSN	Q5TDP6	509 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	YOD1	Q5VVQ6	348 aa	Predicted RBP	9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	SULT1C3	Q6IMI6	304 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	BORA	Q6PGQ7	559 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	SHISA6	Q6ZSJ9	500 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	CENPL	Q8N0S6	344 aa	Predicted RBP	9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	TCAIM	Q8N3R3	496 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	CCT6B	Q92526	530 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	RHBDF1	Q96CC6	855 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	UBXN10	Q96LJ8	280 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	OR2A5	Q96R48	311 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	C17orf62	Q9BQA9	187 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	FUT8	Q9BYC5	575 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	ANKZF1	Q9H8Y5	726 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	SYNPO2L	Q9H987	977 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	DNAJC11	Q9NVH1	559 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	NUDT4	Q9NZJ9	180 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	TBK1	Q9UHD2	729 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	RUVBL1	Q9Y265	456 aa	Known RBP	9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	MAN2B2	Q9Y2E5	1009 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	ANGPTL3	Q9Y5C1	460 aa		9.17	□□□□□ -0.94
PSMD4-208	ENST00000462970	MED13	Q9UHV7	2174 aa		9.16	□□□□□ -0.94
PSMD4-208	ENST00000462970		A0A0A6YYC8	382 aa	Predicted RBP	9.16	□□□□□ -0.94
PSMD4-208	ENST00000462970	TRBC2	A0A5B9	178 aa		9.16	□□□□□ -0.94
PSMD4-208	ENST00000462970	SYCE1L	A8MT33	242 aa		9.16	□□□□□ -0.94
PSMD4-208	ENST00000462970		I3L1I5	382 aa	Predicted RBP	9.16	□□□□□ -0.94
PSMD4-208	ENST00000462970	TXNDC9	O14530	226 aa		9.16	□□□□□ -0.94
PSMD4-208	ENST00000462970	TERT	O14746	1132 aa	Known RBP	9.16	□□□□□ -0.94
PSMD4-208	ENST00000462970	TAPBP	O15533	448 aa		9.16	□□□□□ -0.94
PSMD4-208	ENST00000462970	LCMT2	O60294	686 aa	Known RBP	9.16	□□□□□ -0.94
PSMD4-208	ENST00000462970	KERA	O60938	352 aa		9.16	□□□□□ -0.94
PSMD4-208	ENST00000462970	STK16	O75716	305 aa		9.16	□□□□□ -0.94
PSMD4-208	ENST00000462970	KLHL2	O95198	593 aa		9.16	□□□□□ -0.94
PSMD4-208	ENST00000462970	MED26	O95402	600 aa		9.16	□□□□□ -0.94
PSMD4-208	ENST00000462970	SNRPA	P09012	282 aa	Known RBP	9.16	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms