RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 EMP2P54851 167 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 CSNK1G2P78368 415 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 PRR20EP86478 221 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 PRR20CP86479 221 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 PRR20DP86480 221 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 PRR20BP86481 221 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 PRR20AP86496 221 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 SP140Q13342 867 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 MORF4L2Q15014 288 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 TEDDM1Q5T9Z0 273 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 IRAK1BP1Q5VVH5 260 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 AGTRAPQ6RW13 159 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 PAQR3Q6TCH7 311 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 ISLR2Q6UXK2 745 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 CUZD1Q86UP6 607 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 CREG2Q8IUH2 290 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 PARP9Q8IXQ6 854 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 PDIK1LQ8N165 341 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 CISD2Q8N5K1 135 aaKnown RBP8.7□□□□□ -1.02
BRCA1-207ENST00000461798 AMER3Q8N944 861 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 PSMF1Q92530 271 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 RERGQ96A58 199 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-207ENST00000461798 LRRC39Q96DD0 335 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 TM4SF19Q96DZ7 209 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 CERS2Q96G23 380 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 PDLIM5Q96HC4 596 aaKnown RBP8.7□□□□□ -1.02
BRCA1-207ENST00000461798 RUNDC3BQ96NL0 473 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 PRAP1Q96NZ9 151 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 WDR77Q9BQA1 342 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-207ENST00000461798 SGPP1Q9BX95 441 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 FAM129AQ9BZQ8 928 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 CCDC177Q9NQR7 707 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-207ENST00000461798 C14orf105Q9NVL8 296 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 ASF1BQ9NVP2 202 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 TRMT1Q9NXH9 659 aaKnown RBP8.7□□□□□ -1.02
BRCA1-207ENST00000461798 LUZP4Q9P127 313 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 TRPC4Q9UBN4 977 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 ASIC3Q9UHC3 531 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 ADAMTS6Q9UKP5 1117 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 CORO1CQ9ULV4 474 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-207ENST00000461798 PDE10AQ9Y233 779 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 SHANK1Q9Y566 2161 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 SPTAN1Q13813 2472 aaKnown RBP8.7□□□□□ -1.02
BRCA1-207ENST00000461798 CCDC88CQ9P219 2028 aa8.7□□□□□ -1.02
BRCA1-207ENST00000461798 ESPL1Q14674 2120 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 BLACEA4D250 179 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 WIPF3A6NGB9 483 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 MAP2K7O14733 419 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 HAT1O14929 419 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 P2RX6O15547 441 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 SEMA7AO75326 666 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 KLHL18O94889 574 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 TSPAN12O95859 305 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 DDAH2O95865 285 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 SERPINA7P05543 415 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 COX6A1P12074 109 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 NPPBP16860 134 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 CXCR2P25025 360 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 TSFMP43897 325 aaKnown RBP8.69□□□□□ -1.02
BRCA1-207ENST00000461798 CDKN2DP55273 166 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 RPS15AP62244 130 aaKnown RBP8.69□□□□□ -1.02
BRCA1-207ENST00000461798 MFAP5Q13361 173 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 TSTA3Q13630 321 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-207ENST00000461798 NDUFA9Q16795 377 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 ZXDCQ2QGD7 858 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-207ENST00000461798 BBS9Q3SYG4 887 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 RBM20Q5T481 1227 aaKnown RBP8.69□□□□□ -1.02
BRCA1-207ENST00000461798 THEMIS2Q5TEJ8 643 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 B3GNTL1Q67FW5 361 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-207ENST00000461798 STEAP4Q687X5 459 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 HIBCHQ6NVY1 386 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-207ENST00000461798 RPUSD3Q6P087 351 aaKnown RBP8.69□□□□□ -1.02
BRCA1-207ENST00000461798 TMEM205Q6UW68 189 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 LCTLQ6UWM7 567 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 VN1R4Q7Z5H5 301 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 PLD3Q8IV08 490 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 PALM2Q8IXS6 379 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 KBTBD2Q8IY47 623 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 MYO1HQ8N1T3 1032 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 ABHD11Q8NFV4 315 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 DNAJB14Q8TBM8 379 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 MMABQ96EY8 250 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-207ENST00000461798 THOC3Q96J01 351 aaKnown RBP8.69□□□□□ -1.02
BRCA1-207ENST00000461798 NDNQ99608 321 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 MESP1Q9BRJ9 268 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 TMUB1Q9BVT8 246 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 SARGQ9BW04 601 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 DRC3Q9H069 523 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 ILKAPQ9H0C8 392 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-207ENST00000461798 LRRC4CQ9HCJ2 640 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 VWA7Q9Y334 891 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 COPG1Q9Y678 874 aaKnown RBP8.69□□□□□ -1.02
BRCA1-207ENST00000461798 TEX264Q9Y6I9 313 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 POLEQ07864 2286 aa8.69□□□□□ -1.02
BRCA1-207ENST00000461798 CNTRLQ7Z7A1 2325 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 IGHV1-45A0A0A0MS14 117 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 A0A0A6YYC8 382 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-207ENST00000461798 NSG1A0A0A6YYJ2 146 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 CCDC188H7C350 402 aa8.68□□□□□ -1.02
BRCA1-207ENST00000461798 I3L1I5 382 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms