RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 CUL3Q13618 768 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 RUNX3Q13761 415 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 Q1RN00 199 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 DUSP28Q4G0W2 176 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 CBWD6Q4V339 395 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 CBWD3Q5JTY5 395 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 REG3GQ6UW15 175 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 SLC24A5Q71RS6 500 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 RPAP2Q8IXW5 612 aaPredicted RBP1.47□□□□□ -2.17
PTPN22-203ENST00000460620 ZNF595Q8IYB9 648 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 RTL3Q8N8U3 475 aaKnown RBP1.47□□□□□ -2.17
PTPN22-203ENST00000460620 MRAPQ8TCY5 172 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 MOB3AQ96BX8 217 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 FAM120BQ96EK7 910 aaKnown RBP1.47□□□□□ -2.17
PTPN22-203ENST00000460620 PSMD1Q99460 953 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 HNRNPABQ99729 332 aaKnown RBP1.47□□□□□ -2.17
PTPN22-203ENST00000460620 CCDC3Q9BQI4 270 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 NAALAD2Q9Y3Q0 740 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 A0A1W2PQ09 198 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 AGAP14A8MT82 685 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 H0Y9J4 135 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 RNF103O00237 685 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 EPB41L2O43491 1005 aaKnown RBP1.47□□□□□ -2.17
PTPN22-203ENST00000460620 PFKFB1P16118 471 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 CETN2P41208 172 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 STAT2P52630 851 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 SRPXP78539 464 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 VEZF1Q14119 521 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 OPCMLQ14982 345 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 UMODL1Q5DID0 1318 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 FGD3Q5JSP0 725 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 KHDRBS2Q5VWX1 349 aaKnown RBP1.47□□□□□ -2.17
PTPN22-203ENST00000460620 HSCBQ8IWL3 235 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 MINDY1Q8N5J2 469 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 C11orf42Q8N5U0 333 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 AVL9Q8NBF6 648 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 ZNF622Q969S3 477 aaKnown RBP eCLIP1.47□□□□□ -2.17
PTPN22-203ENST00000460620 MGME1Q9BQP7 344 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 YTHDF1Q9BYJ9 559 aaKnown RBP1.47□□□□□ -2.17
PTPN22-203ENST00000460620 PRRG4Q9BZD6 226 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 EGLN3Q9H6Z9 239 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 MYNNQ9NPC7 610 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 SLC35C2Q9NQQ7 365 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 CLEC5AQ9NY25 188 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 ABCD2Q9UBJ2 740 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 GTF3C4Q9UKN8 822 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 IKZF3Q9UKT9 509 aa1.47□□□□□ -2.17
PTPN22-203ENST00000460620 PTRH2Q9Y3E5 179 aaKnown RBP1.47□□□□□ -2.17
PTPN22-203ENST00000460620 ARHGEF33A8MVX0 844 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 E9PAM4 449 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 F8VVB4 439 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 F8VWA3 439 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 PDHXO00330 501 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 PRDM1O75626 825 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 SAGP10523 405 aaPredicted RBP1.46□□□□□ -2.18
PTPN22-203ENST00000460620 ANPEPP15144 967 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 SAT1P21673 171 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 RPL34P49207 117 aaKnown RBP1.46□□□□□ -2.18
PTPN22-203ENST00000460620 RIDAP52758 137 aaKnown RBP1.46□□□□□ -2.18
PTPN22-203ENST00000460620 NDUFV3P56181 108 aaKnown RBP1.46□□□□□ -2.18
PTPN22-203ENST00000460620 MC1RQ01726 317 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 BAATQ14032 418 aaPredicted RBP1.46□□□□□ -2.18
PTPN22-203ENST00000460620 PCLAFQ15004 111 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 SNAPC1Q16533 368 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 NTRK2Q16620 822 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 HSP90AB4PQ58FF6 505 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 UTF1Q5T230 341 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 C9orf66Q5T8R8 295 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 CCDC70Q6NSX1 233 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 IL17RELQ6ZVW7 336 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 SERINC5Q86VE9 423 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 ZC3H3Q8IXZ2 948 aaKnown RBP1.46□□□□□ -2.18
PTPN22-203ENST00000460620 RCOR2Q8IZ40 523 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 MAML2Q8IZL2 1156 aaPredicted RBP1.46□□□□□ -2.18
PTPN22-203ENST00000460620 RYBPQ8N488 228 aaPredicted RBP1.46□□□□□ -2.18
PTPN22-203ENST00000460620 TSPAN14Q8NG11 270 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 RADILQ96JH8 1075 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 TIGD1Q96MW7 591 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 CCDC28BQ9BUN5 200 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 DNAI2Q9GZS0 605 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 GIMAP4Q9NUV9 329 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 HACD3Q9P035 362 aa1.46□□□□□ -2.18
PTPN22-203ENST00000460620 DDX25Q9UHL0 483 aaKnown RBP1.46□□□□□ -2.18
PTPN22-203ENST00000460620 ZNF215Q9UL58 517 aaPredicted RBP1.46□□□□□ -2.18
PTPN22-203ENST00000460620 FAM205AQ6ZU69 1335 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 NPHP3Q7Z494 1330 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 FAM168BA1KXE4 195 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 CASTOR2A6NHX0 329 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 SNX3O60493 162 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 CYTIPO60759 359 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 TSPAN9O75954 239 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 RENP00797 406 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 KRT6AP02538 564 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 KRT6BP04259 564 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 FAM200BP0CF97 657 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 DNASE1P24855 282 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 GCH1P30793 250 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 GPR183P32249 361 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 KRT6CP48668 564 aa1.45□□□□□ -2.18
PTPN22-203ENST00000460620 LHX1P48742 406 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms