RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 PRMT9Q6P2P2 845 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 CEP128Q6ZU80 1094 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 FRA10AC1Q70Z53 315 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 MRGPREQ86SM8 312 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 ZNF605Q86T29 641 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 SPATA6LQ8N4H0 392 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 IFT81Q8WYA0 676 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 PTERQ96BW5 349 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 OR4K3Q96R72 315 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 EGFL8Q99944 293 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 DERL2Q9GZP9 239 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 ING2Q9H160 280 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 SLC26A1Q9H2B4 701 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 ZNF304Q9HCX3 659 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 ZNF71Q9NQZ8 489 aaPredicted RBP13.59□□□□□ -0.23
THBS3-204ENST00000460050 NINJ2Q9NZG7 142 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 CTSFQ9UBX1 484 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 TLK1Q9UKI8 766 aa13.59□□□□□ -0.23
THBS3-204ENST00000460050 FEZF1A0PJY2 475 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 TXNDC9O14530 226 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 STATHP02808 62 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 ANXA5P08758 320 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 CCDC166P0CW27 439 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 NR1D1P20393 614 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 FBLP22087 321 aaKnown RBP13.58□□□□□ -0.24
THBS3-204ENST00000460050 RAB10P61026 200 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 CDKL1Q00532 357 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 SLMAPQ14BN4 828 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 ZKSCAN8Q15776 578 aaPredicted RBP13.58□□□□□ -0.24
THBS3-204ENST00000460050 LACTB2Q53H82 288 aaPredicted RBP13.58□□□□□ -0.24
THBS3-204ENST00000460050 GARNL3Q5VVW2 1013 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 VN1R4Q7Z5H5 301 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 PTRH1Q86Y79 214 aaKnown RBP13.58□□□□□ -0.24
THBS3-204ENST00000460050 ARHGEF39Q8N4T4 335 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 CEP112Q8N8E3 955 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 COL26A1Q96A83 441 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 MRRFQ96E11 262 aaKnown RBP13.58□□□□□ -0.24
THBS3-204ENST00000460050 MVB12AQ96EY5 273 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 FMO2Q99518 471 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 SPSB2Q99619 263 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 WDR54Q9H977 334 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 ACSS2Q9NR19 701 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 NXT1Q9UKK6 140 aaKnown RBP13.58□□□□□ -0.24
THBS3-204ENST00000460050 CDC14AQ9UNH5 594 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 TP53TG5Q9Y2B4 290 aa13.58□□□□□ -0.24
THBS3-204ENST00000460050 HEMK1Q9Y5R4 338 aaPredicted RBP13.58□□□□□ -0.24
THBS3-204ENST00000460050 TNRC6AQ8NDV7 1962 aaKnown RBP13.58□□□□□ -0.24
THBS3-204ENST00000460050 NUP210LQ5VU65 1888 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 KCNE1BA0A087WTH5 132 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 K7EM74 188 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 CD1DP15813 335 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 PHBP35232 272 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 GRK3P35626 688 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 GMPRP36959 345 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 BCL6P41182 706 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 HNMTP50135 292 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 CCL11P51671 97 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 CCR8P51685 355 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 RRADP55042 308 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 MEF2AQ02078 507 aaPredicted RBP13.57□□□□□ -0.24
THBS3-204ENST00000460050 CSHL1Q14406 222 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 UBAP2Q5T6F2 1119 aaKnown RBP13.57□□□□□ -0.24
THBS3-204ENST00000460050 TCTN3Q6NUS6 607 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 SHISA6Q6ZSJ9 500 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 MED25Q71SY5 747 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 CMC1Q7Z7K0 106 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 THOC6Q86W42 341 aaKnown RBP13.57□□□□□ -0.24
THBS3-204ENST00000460050 RELL1Q8IUW5 271 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 TMEM102Q8N9M5 508 aaPredicted RBP13.57□□□□□ -0.24
THBS3-204ENST00000460050 ABHD11Q8NFV4 315 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 NEIL2Q969S2 332 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 THAP11Q96EK4 314 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 TSNARE1Q96NA8 513 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 IP6K3Q96PC2 410 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 DRC3Q9H069 523 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 TSPYL1Q9H0U9 437 aa13.57□□□□□ -0.24
THBS3-204ENST00000460050 CDC42EP4Q9H3Q1 356 aaKnown RBP13.57□□□□□ -0.24
THBS3-204ENST00000460050 SOX17Q9H6I2 414 aaPredicted RBP13.57□□□□□ -0.24
THBS3-204ENST00000460050 PRRC2CQ9Y520 2896 aaKnown RBP13.56□□□□□ -0.24
THBS3-204ENST00000460050 A0A0A6YYC8 382 aaPredicted RBP13.56□□□□□ -0.24
THBS3-204ENST00000460050 NCF1BA6NI72 391 aaPredicted RBP13.56□□□□□ -0.24
THBS3-204ENST00000460050 VSTM2BA6NLU5 285 aa13.56□□□□□ -0.24
THBS3-204ENST00000460050 NCF1CA8MVU1 366 aaPredicted RBP13.56□□□□□ -0.24
THBS3-204ENST00000460050 I3L1I5 382 aaPredicted RBP13.56□□□□□ -0.24
THBS3-204ENST00000460050 PEX12O00623 359 aa13.56□□□□□ -0.24
THBS3-204ENST00000460050 PRPF4O43172 522 aaKnown RBP eCLIP13.56□□□□□ -0.24
THBS3-204ENST00000460050 FOXS1O43638 330 aa13.56□□□□□ -0.24
THBS3-204ENST00000460050 SLC28A2O43868 658 aa13.56□□□□□ -0.24
THBS3-204ENST00000460050 LCMT2O60294 686 aaKnown RBP13.56□□□□□ -0.24
THBS3-204ENST00000460050 SLC35E2BP0CK96 405 aa13.56□□□□□ -0.24
THBS3-204ENST00000460050 PLA2G2AP14555 144 aa13.56□□□□□ -0.24
THBS3-204ENST00000460050 NCF1P14598 390 aaPredicted RBP13.56□□□□□ -0.24
THBS3-204ENST00000460050 ECHS1P30084 290 aa13.56□□□□□ -0.24
THBS3-204ENST00000460050 ATP6V0D1P61421 351 aa13.56□□□□□ -0.24
THBS3-204ENST00000460050 SNRPNP63162 240 aaKnown RBP13.56□□□□□ -0.24
THBS3-204ENST00000460050 OCA2Q04671 838 aa13.56□□□□□ -0.24
THBS3-204ENST00000460050 DSG2Q14126 1118 aa13.56□□□□□ -0.24
THBS3-204ENST00000460050 TGFBIQ15582 683 aa13.56□□□□□ -0.24
THBS3-204ENST00000460050 OR4D1Q15615 310 aa13.56□□□□□ -0.24
THBS3-204ENST00000460050 NDUFA9Q16795 377 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms