RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 NOVA2Q9UNW9 492 aaKnown RBP15.35■□□□□ 0.05
COL7A1-203ENST00000459756 MYO18BQ8IUG5 2567 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 NUP210LQ5VU65 1888 aa15.35■□□□□ 0.05
COL7A1-203ENST00000459756 IGLV3-12A0A075B6K2 115 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 GSTA2P09210 222 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 ZGLP1P0C6A0 271 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 NPPBP16860 134 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 SSTR1P30872 391 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 PLTPP55058 493 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 FAM53BQ14153 422 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 NDUFA9Q16795 377 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 SBSNQ6UWP8 590 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 TMEM207Q6UWW9 146 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 SHISA6Q6ZSJ9 500 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 PLD3Q8IV08 490 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 GALNT16Q8N428 558 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 ARHGEF39Q8N4T4 335 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 OR56A3Q8NH54 315 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 STT3BQ8TCJ2 826 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 ALKBH8Q96BT7 664 aaKnown RBP15.34■□□□□ 0.05
COL7A1-203ENST00000459756 MIEF2Q96C03 454 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 SMAD5Q99717 465 aaKnown RBP15.34■□□□□ 0.05
COL7A1-203ENST00000459756 CRB3Q9BUF7 120 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 FAM129AQ9BZQ8 928 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 DRC3Q9H069 523 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 POPDC3Q9HBV1 291 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 ATP13A2Q9NQ11 1180 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 SMYD2Q9NRG4 433 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 C5AR2Q9P296 337 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 TXNDC16Q9P2K2 825 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 SH2B3Q9UQQ2 575 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 HS3ST3B1Q9Y662 390 aa15.34■□□□□ 0.05
COL7A1-203ENST00000459756 TCRBV9S1A1TA0A576 114 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 SOCS6O14544 535 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 P2RX6O15547 441 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 DPM1O60762 260 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 ALPPP05187 535 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 ANXA5P08758 320 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 GRK3P35626 688 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 SLC26A3P40879 764 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 TAS2R39P59534 338 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 CSNK1G2P78368 415 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 POU4F1Q01851 419 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 KLC1Q07866 573 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 AIMP2Q13155 320 aaKnown RBP15.33■□□□□ 0.04
COL7A1-203ENST00000459756 MYBPC3Q14896 1274 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 RBBP7Q16576 425 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 PPP1R3AQ16821 1122 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 VWA5B1Q5TIE3 1220 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 KIRREL2Q6UWL6 708 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 C3orf62Q6ZUJ4 267 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 VN1R4Q7Z5H5 301 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 ABHD11Q8NFV4 315 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 KIF18AQ8NI77 898 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 MMABQ96EY8 250 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-203ENST00000459756 TRPC4Q9UBN4 977 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 FBXL4Q9UKA2 621 aa15.33■□□□□ 0.04
COL7A1-203ENST00000459756 SPENQ96T58 3664 aaKnown RBP15.32■□□□□ 0.04
COL7A1-203ENST00000459756 FOXS1O43638 330 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 GUCA1CO95843 209 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 TUBB4AP04350 444 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 CDH1P12830 882 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 CCR8P51685 355 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 SLC12A2P55011 1212 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 FOXK1P85037 733 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 RAPSNQ13702 412 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 ZNF460Q14592 562 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 ZXDCQ2QGD7 858 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-203ENST00000459756 COLEC12Q5KU26 742 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 ADAMTSL2Q86TH1 951 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 CEP97Q8IW35 865 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 AMER3Q8N944 861 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 FBXO25Q8TCJ0 367 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 PYCR2Q96C36 320 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 TSPAN17Q96FV3 270 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 CPNE1Q99829 537 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 TGIF2Q9GZN2 237 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 GPAMQ9HCL2 828 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 MKKSQ9NPJ1 570 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-203ENST00000459756 C14orf105Q9NVL8 296 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 C3orf18Q9UK00 162 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 IKZF3Q9UKT9 509 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 MAP4K5Q9Y4K4 846 aa15.32■□□□□ 0.04
COL7A1-203ENST00000459756 A0A0A6YYC8 382 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-203ENST00000459756 NPEPPSL1A6NEC2 478 aa15.31■□□□□ 0.04
COL7A1-203ENST00000459756 FAM159BA6NKW6 160 aa15.31■□□□□ 0.04
COL7A1-203ENST00000459756 CXorf49A8MYA2 514 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-203ENST00000459756 I3L1I5 382 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-203ENST00000459756 CDC7O00311 574 aa15.31■□□□□ 0.04
COL7A1-203ENST00000459756 PIAS1O75925 651 aa15.31■□□□□ 0.04
COL7A1-203ENST00000459756 IPO13O94829 963 aaKnown RBP15.31■□□□□ 0.04
COL7A1-203ENST00000459756 BCL6P41182 706 aa15.31■□□□□ 0.04
COL7A1-203ENST00000459756 MAGEA4P43358 317 aa15.31■□□□□ 0.04
COL7A1-203ENST00000459756 AVPR1BP47901 424 aa15.31■□□□□ 0.04
COL7A1-203ENST00000459756 CDKL1Q00532 357 aa15.31■□□□□ 0.04
COL7A1-203ENST00000459756 WHAMMP3Q1A5X7 153 aa15.31■□□□□ 0.04
COL7A1-203ENST00000459756 TUBB8Q3ZCM7 444 aa15.31■□□□□ 0.04
COL7A1-203ENST00000459756 NADK2Q4G0N4 442 aa15.31■□□□□ 0.04
COL7A1-203ENST00000459756 VWA2Q5GFL6 755 aa15.31■□□□□ 0.04
COL7A1-203ENST00000459756 ZDHHC24Q6UX98 284 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms