RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 SLC22A18Q96BI1 424 aa23.48■■□□□ 1.35
U2AF1-204ENST00000459639 APOLD1Q96LR9 279 aa23.48■■□□□ 1.35
U2AF1-204ENST00000459639 THTPAQ9BU02 230 aa23.48■■□□□ 1.35
U2AF1-204ENST00000459639 SPHK1Q9NYA1 384 aa23.48■■□□□ 1.35
U2AF1-204ENST00000459639 SPASTQ9UBP0 616 aa23.48■■□□□ 1.35
U2AF1-204ENST00000459639 RUVBL1Q9Y265 456 aaKnown RBP23.48■■□□□ 1.35
U2AF1-204ENST00000459639 DLGAP4Q9Y2H0 992 aa23.48■■□□□ 1.35
U2AF1-204ENST00000459639 GON4LQ3T8J9 2241 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 SNRNP200O75643 2136 aaKnown RBP23.47■■□□□ 1.35
U2AF1-204ENST00000459639 FAM221BA6H8Z2 402 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 H7BY64 318 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 ANGPT2O15123 496 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 ETHE1O95571 254 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 HRH2P25021 359 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 IL12AP29459 219 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 CMPK1P30085 196 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 C21orf59P57076 290 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 CSNK1G2P78368 415 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 ACSM2AQ08AH3 577 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 PTGR1Q14914 329 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 ACSM2BQ68CK6 577 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 SLC9B2Q86UD5 537 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 RBM12BQ8IXT5 1001 aaKnown RBP23.47■■□□□ 1.35
U2AF1-204ENST00000459639 ADGRF3Q8IZF5 1079 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 PCYOX1LQ8NBM8 494 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 FAM46DQ8NEK8 389 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 ZDHHC1Q8WTX9 485 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 C11orf24Q96F05 449 aaPredicted RBP23.47■■□□□ 1.35
U2AF1-204ENST00000459639 SLC45A3Q96JT2 553 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 PRAP1Q96NZ9 151 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 SERPINI1Q99574 410 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 PRM3Q9NNZ6 103 aa23.47■■□□□ 1.35
U2AF1-204ENST00000459639 IGKV1-8A0A0C4DH67 115 aa23.46■■□□□ 1.35
U2AF1-204ENST00000459639 A0A1W2PP18 115 aa23.46■■□□□ 1.35
U2AF1-204ENST00000459639 HNRNPKP61978 463 aaKnown RBP eCLIP23.46■■□□□ 1.35
U2AF1-204ENST00000459639 KIR2DS3Q14952 304 aa23.46■■□□□ 1.35
U2AF1-204ENST00000459639 RBBP5Q15291 538 aaKnown RBP23.46■■□□□ 1.35
U2AF1-204ENST00000459639 VPS26BQ4G0F5 336 aa23.46■■□□□ 1.35
U2AF1-204ENST00000459639 NOXRED1Q6NXP6 359 aa23.46■■□□□ 1.35
U2AF1-204ENST00000459639 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.46■■□□□ 1.35
U2AF1-204ENST00000459639 SDR16C5Q8N3Y7 309 aa23.46■■□□□ 1.35
U2AF1-204ENST00000459639 GLB1L3Q8NCI6 653 aaPredicted RBP23.46■■□□□ 1.35
U2AF1-204ENST00000459639 ZBTB18Q99592 522 aa23.46■■□□□ 1.35
U2AF1-204ENST00000459639 DPY30Q9C005 99 aa23.46■■□□□ 1.35
U2AF1-204ENST00000459639 TMEM184CQ9NVA4 438 aa23.46■■□□□ 1.35
U2AF1-204ENST00000459639 PRPF19Q9UMS4 504 aaKnown RBP23.46■■□□□ 1.35
U2AF1-204ENST00000459639 ISM1B1AKI9 464 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 C9JVG2 144 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 BTN3A3O00478 584 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 RASSF9O75901 435 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 MYO1DO94832 1006 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 SDC1P18827 310 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 CSNK1EP49674 416 aaKnown RBP23.45■■□□□ 1.34
U2AF1-204ENST00000459639 RAP1GDS1P52306 607 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 TBL3Q12788 808 aaKnown RBP23.45■■□□□ 1.34
U2AF1-204ENST00000459639 SF1Q15637 639 aaKnown RBP23.45■■□□□ 1.34
U2AF1-204ENST00000459639 VN1R5Q7Z5H4 357 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 SCUBE1Q8IWY4 988 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 ULK2Q8IYT8 1036 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 AVL9Q8NBF6 648 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 FAM13CQ8NE31 585 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 CHTF18Q8WVB6 975 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 ROPN1LQ96C74 230 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 WDR41Q9HAD4 459 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 SLC6A20Q9NP91 592 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 SIRT5Q9NXA8 310 aa23.45■■□□□ 1.34
U2AF1-204ENST00000459639 TRBC2A0A5B9 178 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 TMEM221A6NGB7 291 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 ANKDD1BA6NHY2 528 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 CCDC154A6NI56 674 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 M0R296 226 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 CLDN8P56748 225 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 TEAD4Q15561 434 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 LYSMD4Q5XG99 296 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 PMS2CLQ68D20 193 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 C1orf210Q8IVY1 113 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 LMX1AQ8TE12 382 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 GAB3Q8WWW8 586 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.44■■□□□ 1.34
U2AF1-204ENST00000459639 A0A088AWK7 358 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 EEDO75530 441 aaKnown RBP23.44■■□□□ 1.34
U2AF1-204ENST00000459639 PTX3P26022 381 aaPredicted RBP23.44■■□□□ 1.34
U2AF1-204ENST00000459639 ADCK2Q7Z695 626 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 RETREG3Q86VR2 466 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 FBXL6Q8N531 539 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 C1orf52Q8N6N3 182 aaKnown RBP23.44■■□□□ 1.34
U2AF1-204ENST00000459639 ANKRD53Q8N9V6 530 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 TTLQ8NG68 377 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 CLMPQ9H6B4 373 aa23.44■■□□□ 1.34
U2AF1-204ENST00000459639 LEF1Q9UJU2 399 aaPredicted RBP23.44■■□□□ 1.34
U2AF1-204ENST00000459639 B4DGG1 531 aa23.43■■□□□ 1.34
U2AF1-204ENST00000459639 TGFB1P01137 390 aa23.43■■□□□ 1.34
U2AF1-204ENST00000459639 GRK3P35626 688 aa23.43■■□□□ 1.34
U2AF1-204ENST00000459639 CLNS1AP54105 237 aaKnown RBP23.43■■□□□ 1.34
U2AF1-204ENST00000459639 HHEXQ03014 270 aa23.43■■□□□ 1.34
U2AF1-204ENST00000459639 CSTF1Q05048 431 aaKnown RBP23.43■■□□□ 1.34
U2AF1-204ENST00000459639 TJAP1Q5JTD0 557 aa23.43■■□□□ 1.34
U2AF1-204ENST00000459639 GALNT18Q6P9A2 607 aa23.43■■□□□ 1.34
U2AF1-204ENST00000459639 CYB5D1Q6P9G0 228 aa23.43■■□□□ 1.34
U2AF1-204ENST00000459639 BNC2Q6ZN30 1099 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms