RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 PLD3Q8IV08 490 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 SPNS2Q8IVW8 549 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 PALM2Q8IXS6 379 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 FBXO15Q8NCQ5 510 aaPredicted RBP14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 DNAJB14Q8TBM8 379 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 CD200R1Q8TD46 325 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 PPP4R1Q8TF05 950 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 ASB11Q8WXH4 323 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 MVB12AQ96EY5 273 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 NDNQ99608 321 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 EBNA1BP2Q99848 306 aaKnown RBP14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 DRC3Q9H069 523 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 CCDC177Q9NQR7 707 aaPredicted RBP14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 AGPAT4Q9NRZ5 378 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 C14orf105Q9NVL8 296 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 KLHL42Q9P2K6 505 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 NOVA2Q9UNW9 492 aaKnown RBP14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 PCDHGA10Q9Y5H3 936 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 CSAG2Q9Y5P2 127 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 CNTRLQ7Z7A1 2325 aa14.98□□□□□ -0.01
CHCHD3-204ENST00000457942 IGKV1-8A0A0C4DH67 115 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 PABPN1LA6NDY0 278 aaKnown RBP14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 USP27XA6NNY8 438 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 TXNDC9O14530 226 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 HAT1O14929 419 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 ZSCAN12O43309 604 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 HAUS5O94927 633 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 STATHP02808 62 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 HEXBP07686 556 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 IMPA1P29218 277 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 MAGEA3P43357 314 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 RGS4P49798 205 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 EMP2P54851 167 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 EMP3P54852 163 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 CDC16Q13042 620 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 CRYMQ14894 314 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 NDUFA9Q16795 377 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 GARNL3Q5VVW2 1013 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 FAAH2Q6GMR7 532 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 ZNF425Q6IV72 752 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 LRRC8EQ6NSJ5 796 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 SLC34A3Q8N130 599 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 ACTRT1Q8TDG2 376 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 ALKBH8Q96BT7 664 aaKnown RBP14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 SIGLEC10Q96LC7 697 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 MESP1Q9BRJ9 268 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 AARSD1Q9BTE6 412 aaKnown RBP14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 PYCARDQ9ULZ3 195 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 ENTPD4Q9Y227 616 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 MED16Q9Y2X0 877 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 NEU2Q9Y3R4 380 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 F8P00451 2351 aa14.97□□□□□ -0.01
CHCHD3-204ENST00000457942 A0A0A6YYC8 382 aaPredicted RBP14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 IDSB3KWA1 339 aa14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 H7BY64 318 aa14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 I3L1I5 382 aaPredicted RBP14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 P2RX6O15547 441 aa14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 AVPR1BP47901 424 aa14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 TBPL1P62380 186 aa14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 ZNF169Q14929 603 aaPredicted RBP14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 RNASEH2BQ5TBB1 312 aaKnown RBP14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 MFSD4BQ5TF39 518 aa14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 ISLR2Q6UXK2 745 aa14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 KBTBD2Q8IY47 623 aa14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 MYO1HQ8N1T3 1032 aa14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 AGGF1Q8N302 714 aaeCLIP14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 MCOLN3Q8TDD5 553 aa14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 PRAP1Q96NZ9 151 aa14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 OR2A5Q96R48 311 aa14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 MKKSQ9NPJ1 570 aaPredicted RBP14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 PPANQ9NQ55 473 aaKnown RBP14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 ITGB1BP2Q9UKP3 347 aa14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 SETD2Q9BYW2 2564 aaPredicted RBP14.96□□□□□ -0.01
CHCHD3-204ENST00000457942 GFYI3L273 518 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 EIF3FO00303 357 aaPredicted RBP14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 BANF1O75531 89 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 SNRPB2P08579 225 aaKnown RBP14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 COX6A1P12074 109 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 SKIV2L2P42285 1042 aaKnown RBP14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 ARG2P78540 354 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 MAT1AQ00266 395 aaKnown RBP14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 DHX9Q08211 1270 aaKnown RBP14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 Q0VFX4 171 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 MFAP5Q13361 173 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 TLR1Q15399 786 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 ZRSR2Q15696 482 aaKnown RBP14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 SYT16Q17RD7 645 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 BBS9Q3SYG4 887 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 SP5Q6BEB4 398 aaPredicted RBP14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 NDUFAF7Q7L592 441 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 PCGF5Q86SE9 256 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 LAPTM4BQ86VI4 370 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 FJX1Q86VR8 437 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 C2CD4AQ8NCU7 369 aaPredicted RBP14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 MAGEB10Q96LZ2 347 aaPredicted RBP14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 DDX47Q9H0S4 455 aaKnown RBP14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 SYNPO2LQ9H987 977 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 RIC8BQ9NVN3 520 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 TAS2R13Q9NYV9 303 aa14.95□□□□□ -0.02
CHCHD3-204ENST00000457942 PTGFRNQ9P2B2 879 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms