RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 LCA5Q86VQ0 697 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 RIBC1Q8N443 379 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-206ENST00000457035 ZNF248Q8NDW4 579 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 UBTD2Q8WUN7 234 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 SLC5A11Q8WWX8 675 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 EXT2Q93063 718 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 NKD1Q969G9 470 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 RNF31Q96EP0 1072 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 ZFYVE21Q9BQ24 234 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 SARGQ9BW04 601 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 ULBP3Q9BZM4 244 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 CD244Q9BZW8 370 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 CNOT10Q9H9A5 744 aaKnown RBP9.62□□□□□ -0.87
ATG4A-206ENST00000457035 AKIRIN1Q9H9L7 192 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-206ENST00000457035 FANCEQ9HB96 536 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 PCMTD2Q9NV79 361 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 WWOXQ9NZC7 414 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 DCDC2Q9UHG0 476 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 LGALS13Q9UHV8 139 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 KCNE2Q9Y6J6 123 aa9.62□□□□□ -0.87
ATG4A-206ENST00000457035 A0A087WV48 116 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 FITM1A5D6W6 292 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 E7EQ34 232 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 RNF223E7ERA6 249 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 H0YGG7 62 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 HAT1O14929 419 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 ZNF749O43361 778 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 SCRG1O75711 98 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 OR2B3O76000 313 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 WDR47O94967 919 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 S100BP04271 92 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 GSTA1P08263 222 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 LIPCP11150 499 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 EZRP15311 586 aaKnown RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 KRT15P19012 456 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 EPORP19235 508 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 RORAP35398 523 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 CCR8P51685 355 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 ALDH18A1P54886 795 aaKnown RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 VSX2P58304 361 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 ARF3P61204 181 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 PCDH1Q08174 1060 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 ZNF844Q08AG5 666 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 IFFO1Q0D2I5 559 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 CDC16Q13042 620 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 CLN3Q13286 438 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 MAP7Q14244 749 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 SETDB1Q15047 1291 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 PCBP2Q15366 365 aaKnown RBP eCLIP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 PFKFB4Q16877 469 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 PRTGQ2VWP7 1150 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 TCTE1Q5JU00 501 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 C16orf46Q6P387 395 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 TLDC1Q6P9B6 456 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 NXPE4Q6UWF7 544 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 C6orf15Q6UXA7 325 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 ZNF517Q6ZMY9 492 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 SLCO4C1Q6ZQN7 724 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 TRABD2AQ86V40 505 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 TMEM126BQ8IUX1 230 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 PLD3Q8IV08 490 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 GPR135Q8IZ08 494 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 NLGN4XQ8N0W4 816 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 ZNF655Q8N720 491 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 GALNT6Q8NCL4 622 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 NLGN4YQ8NFZ3 816 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 N4BP2L2Q92802 583 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 NAF1Q96HR8 494 aaKnown RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 SCYL1Q96KG9 808 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 LRFN5Q96NI6 719 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 BBC3Q96PG8 261 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 SELENOSQ9BQE4 189 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 DPH1Q9BZG8 443 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 MRPL46Q9H2W6 279 aaKnown RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 STARD5Q9NSY2 213 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 DNAJC11Q9NVH1 559 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 GPRC5BQ9NZH0 403 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 CPSF2Q9P2I0 782 aaKnown RBP9.61□□□□□ -0.87
ATG4A-206ENST00000457035 XPR1Q9UBH6 696 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 EMCNQ9ULC0 261 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 AP1M2Q9Y6Q5 423 aa9.61□□□□□ -0.87
ATG4A-206ENST00000457035 CNTRLQ7Z7A1 2325 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 FEZF1A0PJY2 475 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 LRRC14BA6NHZ5 514 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 ZSCAN9O15535 394 aaPredicted RBP9.6□□□□□ -0.87
ATG4A-206ENST00000457035 EFSO43281 561 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 CCNT2O60583 730 aaKnown RBP9.6□□□□□ -0.87
ATG4A-206ENST00000457035 RAD1O60671 282 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 CPNE3O75131 537 aaKnown RBP9.6□□□□□ -0.87
ATG4A-206ENST00000457035 ERLIN1O75477 346 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 WFS1O76024 890 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 SIX3O95343 332 aaPredicted RBP9.6□□□□□ -0.87
ATG4A-206ENST00000457035 C1GALT1C1LP0DN25 315 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 GFAPP14136 432 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 KRT4P19013 534 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 GNAZP19086 355 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 CRHR1P34998 444 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 CASP2P42575 452 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 CCT5P48643 541 aa9.6□□□□□ -0.87
ATG4A-206ENST00000457035 RPS15AP62244 130 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms