RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 SKA2Q8WVK7 121 aaPredicted RBP12.03□□□□□ -0.48
LINC00959-201ENST00000456581 PPP1R14BQ96C90 147 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 ACPTQ9BZG2 426 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 C8orf4Q9NR00 106 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 DCAF13Q9NV06 445 aaKnown RBP12.03□□□□□ -0.48
LINC00959-201ENST00000456581 PPT2Q9UMR5 302 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 ERVK-11Q9UQG0 969 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 PCDHGA10Q9Y5H3 936 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 OTCP00480 354 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 S100BP04271 92 aaPredicted RBP12.03□□□□□ -0.48
LINC00959-201ENST00000456581 CA3P07451 260 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 IGFBP5P24593 272 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 ETV3P41162 512 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 MAPK8P45983 427 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 DAPP51397 102 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 SF3B4Q15427 424 aaKnown RBP eCLIP12.03□□□□□ -0.48
LINC00959-201ENST00000456581 NPTX1Q15818 432 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 SPATS1Q496A3 300 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 ARHGAP15Q53QZ3 475 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 RUNDC3AQ59EK9 446 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 DOK6Q6PKX4 331 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 SLC22A16Q86VW1 577 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 CCDC71Q8IV32 467 aaPredicted RBP12.03□□□□□ -0.48
LINC00959-201ENST00000456581 FOXJ1Q92949 421 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 FAM120BQ96EK7 910 aaKnown RBP12.03□□□□□ -0.48
LINC00959-201ENST00000456581 MRGPRX3Q96LB0 322 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 ZNF347Q96SE7 839 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 LRTM1Q9HBL6 345 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 SERHLQ9NQF3 203 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 ERVW-1Q9UQF0 538 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 MRPS23Q9Y3D9 190 aaKnown RBP12.03□□□□□ -0.48
LINC00959-201ENST00000456581 DOCK9Q9BZ29 2069 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 M0R129 80 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 PLK4O00444 970 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 SSX4O60224 188 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 PDYNP01213 254 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 CD9P21926 228 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 AQP1P29972 269 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 MRPL19P49406 292 aaKnown RBP12.02□□□□□ -0.48
LINC00959-201ENST00000456581 CRISP3P54108 245 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 PCBP2Q15366 365 aaKnown RBP eCLIP12.02□□□□□ -0.48
LINC00959-201ENST00000456581 KCNJ8Q15842 424 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 GDPD4Q6W3E5 623 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 ZDHHC21Q8IVQ6 265 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 CCDC115Q96NT0 180 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 MCCC1Q96RQ3 725 aaPredicted RBP12.02□□□□□ -0.48
LINC00959-201ENST00000456581 ZBTB18Q99592 522 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 KLHL25Q9H0H3 589 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 SIRT5Q9NXA8 310 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 OPTCQ9UBM4 332 aa12.02□□□□□ -0.48
LINC00959-201ENST00000456581 EIF3LQ9Y262 564 aaKnown RBP12.02□□□□□ -0.48
LINC00959-201ENST00000456581 C16orf96A6NNT2 1141 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 M0R3G1 203 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 HLA-EP13747 358 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 POLR2EP19388 210 aaKnown RBP12.02□□□□□ -0.49
LINC00959-201ENST00000456581 NR4A2P43354 598 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 SPINT3P49223 89 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 TPTEP56180 551 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 SELENBP1Q13228 472 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 TUBA3CQ13748 450 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 BOP1Q14137 746 aaKnown RBP12.02□□□□□ -0.49
LINC00959-201ENST00000456581 C9orf50Q5SZB4 431 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 OR4F3Q6IEY1 312 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 SPATC1Q76KD6 591 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 PAGE2Q7Z2X7 111 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 ADAMTSL2Q86TH1 951 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 FAM83FQ8NEG4 500 aaPredicted RBP12.02□□□□□ -0.49
LINC00959-201ENST00000456581 ULK4Q96C45 1275 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 LYSMD1Q96S90 227 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 COPS8Q99627 209 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 MROQ9BYG7 248 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 CLMPQ9H6B4 373 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 SCHIP1Q9P0W5 487 aaPredicted RBP12.02□□□□□ -0.49
LINC00959-201ENST00000456581 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC00959-201ENST00000456581 KNL1Q8NG31 2342 aa12.02□□□□□ -0.49
LINC00959-201ENST00000456581 TMEM202A6NGA9 273 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 RAD51BO15315 384 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 DNTTP04053 509 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 EPORP19235 508 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 TGM1P22735 817 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 RPS3P23396 243 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 GNPDA1P46926 289 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 RGS4P49798 205 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 VLDLRP98155 873 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 DHCR24Q15392 516 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 USP39Q53GS9 565 aaKnown RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 CPZQ66K79 652 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 AHSA2Q719I0 299 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 CLIP4Q8N3C7 705 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 LILRA3Q8N6C8 439 aaPredicted RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 PSMA8Q8TAA3 256 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 NXPE3Q969Y0 559 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 PPP3R2Q96LZ3 170 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 HTATIP2Q9BUP3 242 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 FAM126AQ9BYI3 521 aaPredicted RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 ZBTB20Q9HC78 741 aaPredicted RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 ABCB10Q9NRK6 738 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 QPCTLQ9NXS2 382 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 C3orf18Q9UK00 162 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 CARNS1A5YM72 827 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms