RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 NUDT22Q9BRQ3 303 aa10.8□□□□□ -0.68
TRAF4-206ENST00000454852 SIKE1Q9BRV8 207 aa10.8□□□□□ -0.68
TRAF4-206ENST00000454852 ZNF768Q9H5H4 540 aaKnown RBP10.8□□□□□ -0.68
TRAF4-206ENST00000454852 TNFRSF12AQ9NP84 129 aa10.8□□□□□ -0.68
TRAF4-206ENST00000454852 SLCO1B3Q9NPD5 702 aa10.8□□□□□ -0.68
TRAF4-206ENST00000454852 ZDHHC2Q9UIJ5 367 aa10.8□□□□□ -0.68
TRAF4-206ENST00000454852 ZNF490Q9ULM2 529 aaPredicted RBP10.8□□□□□ -0.68
TRAF4-206ENST00000454852 TRAF6Q9Y4K3 522 aa10.8□□□□□ -0.68
TRAF4-206ENST00000454852 PCDHGA11Q9Y5H2 935 aa10.8□□□□□ -0.68
TRAF4-206ENST00000454852 IGHV5-10-1A0A0J9YXX1 117 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 ZNF195O14628 629 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 KRT6AP02538 564 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 KRT6BP04259 564 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 CAPN1P07384 714 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 CEACAM1P13688 526 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 HSD3B1P14060 373 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 HOXB3P14651 431 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-206ENST00000454852 ST6GAL1P15907 406 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 ALOX15P16050 662 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-206ENST00000454852 CDH3P22223 829 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 MPSTP25325 297 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 HSD3B2P26439 372 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 CCKBRP32239 447 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 GRK3P35626 688 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 PIK3CBP42338 1070 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 GABRA4P48169 554 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 KRT6CP48668 564 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 INHBCP55103 352 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 FOXA1P55317 472 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 RPS15AP62244 130 aaKnown RBP10.79□□□□□ -0.68
TRAF4-206ENST00000454852 SPIDRQ14159 915 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 ZIC1Q15915 447 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 HIST2H2ACQ16777 129 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-206ENST00000454852 AMZ1Q400G9 498 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 SH2D4BQ5SQS7 431 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 FRG2Q64ET8 278 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 HIST2H2AA3Q6FI13 130 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 MED27Q6P2C8 311 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 FBXO42Q6P3S6 717 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 USP53Q70EK8 1073 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 TMPRSS9Q7Z410 1059 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 TRIM46Q7Z4K8 759 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 TRIM73Q86UV7 250 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 CRLF3Q8IUI8 442 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 LRRC34Q8IZ02 419 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 D2HGDHQ8N465 521 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 DNAJC22Q8N4W6 341 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 TBC1D19Q8N5T2 526 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 CDYL2Q8N8U2 506 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 MFSD9Q8NBP5 474 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 OR7G3Q8NG95 312 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 METTL6Q8TCB7 284 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 TM4SF19Q96DZ7 209 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 CHMP6Q96FZ7 201 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 PPM1MQ96MI6 270 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 ZNF285Q96NJ3 590 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 TGM7Q96PF1 710 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 CDK15Q96Q40 435 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 FRG2BQ96QU4 278 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 OR2A5Q96R48 311 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 SPNS1Q9H2V7 528 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 VTI1BQ9UEU0 232 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 RAPGEFL1Q9UHV5 662 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 SNX6Q9UNH7 406 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 PCDHGA4Q9Y5G9 962 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 DNAJC15Q9Y5T4 150 aa10.79□□□□□ -0.68
TRAF4-206ENST00000454852 PCNX2A6NKB5 2137 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 IGHV5-51A0A0C4DH38 117 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 SLC9B1P1A6NJY1 282 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 TMX2-CTNND1H3BSU7 103 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 FOXE1O00358 373 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-206ENST00000454852 MANBAO00462 879 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 HDAC3O15379 428 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 KIF1CO43896 1103 aaKnown RBP10.78□□□□□ -0.68
TRAF4-206ENST00000454852 SRPX2O60687 465 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-206ENST00000454852 CTSVO60911 334 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 CLEC3AO75596 197 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 NELFEP18615 380 aaKnown RBP10.78□□□□□ -0.68
TRAF4-206ENST00000454852 SDHBP21912 280 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 PRPH2P23942 346 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 PDX1P52945 283 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 ARFIP1P53367 373 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 HSD11B2P80365 405 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 ZRSR2Q15696 482 aaKnown RBP10.78□□□□□ -0.68
TRAF4-206ENST00000454852 CPSF6Q16630 551 aaKnown RBP eCLIP10.78□□□□□ -0.68
TRAF4-206ENST00000454852 ZC3H12BQ5HYM0 836 aaKnown RBP10.78□□□□□ -0.68
TRAF4-206ENST00000454852 MANEAQ5SRI9 462 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 CACHD1Q5VU97 1274 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 TTC19Q6DKK2 380 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-206ENST00000454852 FAM92BQ6ZTR7 304 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 FAM20CQ8IXL6 584 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 AFAP1L2Q8N4X5 818 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 GBP7Q8N8V2 638 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-206ENST00000454852 DEFB124Q8NES8 71 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 KCNA7Q96RP8 456 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 ZFYVE21Q9BQ24 234 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 BRF2Q9HAW0 419 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 PDE7BQ9NP56 450 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 PFDN4Q9NQP4 134 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 ABCF3Q9NUQ8 709 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms