RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 RPN2P04844 631 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 HPCAL1P37235 193 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 ALDH9A1P49189 494 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 PHEXP78562 749 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 LAPTM5Q13571 262 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 COL9A2Q14055 689 aaPredicted RBP13.17□□□□□ -0.3
CLK3-203ENST00000454830 ENPP6Q6UWR7 440 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 MICU2Q8IYU8 434 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 SIPA1Q96FS4 1042 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 SPNS1Q9H2V7 528 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 TRIT1Q9H3H1 467 aaKnown RBP13.17□□□□□ -0.3
CLK3-203ENST00000454830 DPEP2Q9H4A9 486 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 UBAP1Q9NZ09 502 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 THEGQ9P2T0 379 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 A0A0G2JN53 185 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 H0YIV9 168 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 CLIC1O00299 241 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 KMOO15229 486 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 RNGTTO60942 597 aaKnown RBP13.17□□□□□ -0.3
CLK3-203ENST00000454830 KLK1P06870 262 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 ENGP17813 658 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 AQP1P29972 269 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 SOAT1P35610 550 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 TPD52P55327 224 aaPredicted RBP13.17□□□□□ -0.3
CLK3-203ENST00000454830 POLE2P56282 527 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 TMIGD1Q6UXZ0 262 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 PRR23BQ6ZRT6 265 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 PDZD3Q86UT5 571 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 GALNT13Q8IUC8 556 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 MSRB3Q8IXL7 192 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 SORBS1Q9BX66 1292 aaKnown RBP13.17□□□□□ -0.3
CLK3-203ENST00000454830 SLC17A9Q9BYT1 436 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 CLEC1BQ9P126 229 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 CA5BQ9Y2D0 317 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 U3KQV3 271 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 REV3LO60673 3130 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 C17orf113A0A1B0GUU1 675 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 H7BY64 318 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 DEAF1O75398 565 aaPredicted RBP13.17□□□□□ -0.3
CLK3-203ENST00000454830 FKBP9O95302 570 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 UMPSP11172 480 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 CD72P21854 359 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 EIF2DP41214 584 aaKnown RBP13.17□□□□□ -0.3
CLK3-203ENST00000454830 SRSF11Q05519 484 aaKnown RBP13.17□□□□□ -0.3
CLK3-203ENST00000454830 C2orf80Q0P641 193 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 UGT8Q16880 541 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 RUNDC3AQ59EK9 446 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 TMEM196Q5HYL7 178 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 NXPE4Q6UWF7 544 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 ADAMTSL4Q6UY14 1074 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 FKBP9P1Q75LS8 142 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 PTRH1Q86Y79 214 aaKnown RBP13.17□□□□□ -0.3
CLK3-203ENST00000454830 PRAP1Q96NZ9 151 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 UGT2B28Q9BY64 529 aa13.17□□□□□ -0.3
CLK3-203ENST00000454830 A0A096LPI6 279 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 OR52A4PA6NMU1 304 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 SERPINA1P01009 418 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 EGFP01133 1207 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 GGT1P19440 569 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 RPS21P63220 83 aaKnown RBP13.16□□□□□ -0.3
CLK3-203ENST00000454830 SKIV2LQ15477 1246 aaKnown RBP13.16□□□□□ -0.3
CLK3-203ENST00000454830 FAM20CQ8IXL6 584 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 KRT78Q8N1N4 520 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 RAB42Q8N4Z0 105 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 FAM86B1Q8N7N1 296 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 JPH3Q8WXH2 748 aaPredicted RBP13.16□□□□□ -0.3
CLK3-203ENST00000454830 SLC47A1Q96FL8 570 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 OSBPL11Q9BXB4 747 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 PAIP1Q9H074 479 aaKnown RBP13.16□□□□□ -0.3
CLK3-203ENST00000454830 OR52A5Q9H2C5 316 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 MIEF1Q9NQG6 463 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 ASIC5Q9NY37 505 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 PNMA8BQ9ULN7 279 aaPredicted RBP13.16□□□□□ -0.3
CLK3-203ENST00000454830 PIAS3Q9Y6X2 628 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 FEZF1A0PJY2 475 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 GRXCR2A6NFK2 248 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 RTCAO00442 366 aaKnown RBP13.16□□□□□ -0.3
CLK3-203ENST00000454830 CLIC3O95833 236 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 CST1P01037 141 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 MTHFRP42898 656 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 CLDN2P57739 230 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 MC1RQ01726 317 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 DUOXA1Q1HG43 343 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 MTSS1LQ765P7 747 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 SZRD1Q7Z422 152 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 DPH2Q9BQC3 489 aaPredicted RBP13.16□□□□□ -0.3
CLK3-203ENST00000454830 SOX17Q9H6I2 414 aaPredicted RBP13.16□□□□□ -0.3
CLK3-203ENST00000454830 AGPAT4Q9NRZ5 378 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 BAG5Q9UL15 447 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 NUP210Q8TEM1 1887 aaPredicted RBP13.16□□□□□ -0.3
CLK3-203ENST00000454830 KIF26AQ9ULI4 1882 aaPredicted RBP13.16□□□□□ -0.3
CLK3-203ENST00000454830 K7EQS6 105 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 CACNB4O00305 520 aaPredicted RBP13.16□□□□□ -0.3
CLK3-203ENST00000454830 ASMTP46597 345 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 ADAM15Q13444 863 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 SPIDRQ14159 915 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 SPATS1Q496A3 300 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 COMMD6Q7Z4G1 85 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 FAM47BQ8NA70 645 aa13.16□□□□□ -0.3
CLK3-203ENST00000454830 WDR48Q8TAF3 677 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms