RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 VIPR2P41587 438 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 MRPL28Q13084 256 aaKnown RBP10.83□□□□□ -0.68
DDR1-240ENST00000454612 OLIG3Q7RTU3 272 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 ZFAND4Q86XD8 727 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 FAM217AQ8IXS0 508 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 ELMOD2Q8IZ81 293 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 NLGN4XQ8N0W4 816 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 PHF10Q8WUB8 498 aaKnown RBP10.83□□□□□ -0.68
DDR1-240ENST00000454612 STON2Q8WXE9 905 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 CLP1Q92989 425 aaKnown RBP10.83□□□□□ -0.68
DDR1-240ENST00000454612 APOL4Q9BPW4 351 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 DUSP26Q9BV47 211 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 NUSAP1Q9BXS6 441 aaKnown RBP10.83□□□□□ -0.68
DDR1-240ENST00000454612 UCKL1Q9NWZ5 548 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 DNAJB9Q9UBS3 223 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 CLCA2Q9UQC9 943 aa10.83□□□□□ -0.68
DDR1-240ENST00000454612 SNTNA6NMZ2 147 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 DRGXA6NNA5 263 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 EIF3FO00303 357 aaPredicted RBP10.82□□□□□ -0.68
DDR1-240ENST00000454612 TBX1O43435 398 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 C1QCP02747 245 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 RPS17P08708 135 aaKnown RBP10.82□□□□□ -0.68
DDR1-240ENST00000454612 C8orf89P0DMQ9 161 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 PABPC1P11940 636 aaKnown RBP10.82□□□□□ -0.68
DDR1-240ENST00000454612 CD247P20963 164 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 CLK3P49761 638 aaKnown RBP10.82□□□□□ -0.68
DDR1-240ENST00000454612 GSTM4Q03013 218 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 ZFP69Q49AA0 526 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 ARMC4Q5T2S8 1044 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 ERAP2Q6P179 960 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 CHPFQ8IZ52 775 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 GALNT6Q8NCL4 622 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 ZNF597Q96LX8 424 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 P2RY13Q9BPV8 354 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 RHNO1Q9BSD3 238 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 LHPPQ9H008 270 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 ZIM2Q9NZV7 527 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 NDUFS2O75306 463 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 PCCBP05166 539 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 RRM2P31350 389 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 MANFP55145 182 aaKnown RBP10.82□□□□□ -0.68
DDR1-240ENST00000454612 RING1Q06587 406 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 RAPSNQ13702 412 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 RCAN2Q14206 197 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 SLBPQ14493 270 aaKnown RBP eCLIP10.82□□□□□ -0.68
DDR1-240ENST00000454612 RFX4Q33E94 735 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 AGTRAPQ6RW13 159 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 DEPDC4Q8N2C3 294 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 PROX1Q92786 737 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 PAWRQ96IZ0 340 aaKnown RBP10.82□□□□□ -0.68
DDR1-240ENST00000454612 MAELQ96JY0 434 aaKnown RBP10.82□□□□□ -0.68
DDR1-240ENST00000454612 HSH2DQ96JZ2 352 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 KCNS3Q9BQ31 491 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 TPT1P8Q9HAU6 139 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 USE1Q9NZ43 259 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 TMCC3Q9ULS5 477 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 TMEM202A6NGA9 273 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 TNFRSF11BO00300 401 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 OR7A17O14581 309 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 POP4O95707 220 aaKnown RBP10.82□□□□□ -0.68
DDR1-240ENST00000454612 SLC16A8O95907 504 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 FABP3P05413 133 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 EPHX1P07099 455 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 PIGAP37287 484 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 NCS1P62166 190 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 EPS8Q12929 822 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 GRIN2CQ14957 1233 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 TAB1Q15750 504 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 NOXRED1Q6NXP6 359 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 CYHR1Q6ZMK1 362 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 PPCDCQ96CD2 204 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 RBM4BQ9BQ04 359 aaKnown RBP10.82□□□□□ -0.68
DDR1-240ENST00000454612 RBM4Q9BWF3 364 aaKnown RBP10.82□□□□□ -0.68
DDR1-240ENST00000454612 XKR8Q9H6D3 395 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 ZNF696Q9H7X3 374 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 ZDHHC3Q9NYG2 299 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 VPS29Q9UBQ0 182 aa10.82□□□□□ -0.68
DDR1-240ENST00000454612 E7EQ34 232 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 ALOX5P09917 674 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 ATP1B2P14415 290 aaPredicted RBP10.81□□□□□ -0.68
DDR1-240ENST00000454612 MATN1P21941 496 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 CST5P28325 142 aaPredicted RBP10.81□□□□□ -0.68
DDR1-240ENST00000454612 FEN1P39748 380 aaKnown RBP10.81□□□□□ -0.68
DDR1-240ENST00000454612 BUD31P41223 144 aaPredicted RBP10.81□□□□□ -0.68
DDR1-240ENST00000454612 ALDH3A2P51648 485 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 CTSCP53634 463 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 CATSPEREQ5SY80 951 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 CXorf57Q6NSI4 855 aaKnown RBP10.81□□□□□ -0.68
DDR1-240ENST00000454612 C22orf39Q6P5X5 142 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 TPRG1Q6ZUI0 275 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 THOC6Q86W42 341 aaKnown RBP10.81□□□□□ -0.68
DDR1-240ENST00000454612 TRMT61BQ9BVS5 477 aaKnown RBP10.81□□□□□ -0.68
DDR1-240ENST00000454612 ACPTQ9BZG2 426 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 ABCB9Q9NP78 766 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 AGPAT4Q9NRZ5 378 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 CD300AQ9UGN4 299 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 KLHL20Q9Y2M5 609 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 LYVE1Q9Y5Y7 322 aa10.81□□□□□ -0.68
DDR1-240ENST00000454612 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.81□□□□□ -0.68
DDR1-240ENST00000454612 SLC35F4A4IF30 521 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms