RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 DCDP81605 110 aaKnown RBP13.52□□□□□ -0.25
HDAC4-205ENST00000454542 IL10RAQ13651 578 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 NKAIN1Q4KMZ8 207 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 GARNL3Q5VVW2 1013 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 SULT1C3Q6IMI6 304 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 ADGRD1Q6QNK2 874 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 ADCK2Q7Z695 626 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 THOC6Q86W42 341 aaKnown RBP13.52□□□□□ -0.25
HDAC4-205ENST00000454542 GPSM1Q86YR5 675 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 PLD3Q8IV08 490 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 CSNK1A1LQ8N752 337 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 LSM14AQ8ND56 463 aaKnown RBP13.52□□□□□ -0.25
HDAC4-205ENST00000454542 UHMK1Q8TAS1 419 aaKnown RBP13.52□□□□□ -0.25
HDAC4-205ENST00000454542 ADAMTS17Q8TE56 1095 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 KCTD4Q8WVF5 259 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 NXNL1Q96CM4 212 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 TM4SF19Q96DZ7 209 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 MVB12AQ96EY5 273 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 CATSPER2Q96P56 530 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 EGFL8Q99944 293 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 SLC7A5P2Q9GIP4 190 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 SLC26A1Q9H2B4 701 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 SPNS1Q9H2V7 528 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 ALG9Q9H6U8 611 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 STARD5Q9NSY2 213 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 ABCF3Q9NUQ8 709 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 WDR70Q9NW82 654 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 IRAK4Q9NWZ3 460 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 COPG2Q9UBF2 871 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 PTBP2Q9UKA9 531 aaKnown RBP13.52□□□□□ -0.25
HDAC4-205ENST00000454542 NUP210LQ5VU65 1888 aa13.52□□□□□ -0.25
HDAC4-205ENST00000454542 HYKKA2RU49 373 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 C9J4A7 227 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 POC1B-GALNT4F8VUJ3 575 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 ATXN7O15265 892 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-205ENST00000454542 KLF7O75840 302 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-205ENST00000454542 KLHL2O95198 593 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 FURINP09958 794 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 AGXTP21549 392 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 TYK2P29597 1187 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 MSH2P43246 934 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 KCNC1P48547 511 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 CCR8P51685 355 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 RPS15P62841 145 aaKnown RBP13.51□□□□□ -0.25
HDAC4-205ENST00000454542 CYP4F2P78329 520 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 NFKB2Q00653 900 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 E2F2Q14209 437 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 UGT8Q16880 541 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 MUM1Q2TAK8 710 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 HKDC1Q2TB90 917 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 FAM214AQ32MH5 1076 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 C18orf21Q32NC0 220 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-205ENST00000454542 TECRLQ5HYJ1 363 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 C1orf189Q5VU69 101 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 TTLL10Q6ZVT0 673 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 LRRC70Q7Z2Q7 622 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 CNPY4Q8N129 248 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 STAG3L4Q8TBR4 150 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 BBC3Q96PG8 261 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-205ENST00000454542 WWOXQ9NZC7 414 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 GPRC5BQ9NZH0 403 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 TCFL5Q9UL49 500 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 RNF112Q9ULX5 631 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 SLC22A14Q9Y267 594 aa13.51□□□□□ -0.25
HDAC4-205ENST00000454542 FARSAQ9Y285 508 aaKnown RBP13.51□□□□□ -0.25
HDAC4-205ENST00000454542 TRBC2A0A5B9 178 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 NCF1BA6NI72 391 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-205ENST00000454542 NCF1CA8MVU1 366 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-205ENST00000454542 TRIM49D1C9J1S8 452 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 TXNDC9O14530 226 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 KLK8O60259 260 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 WDR47O94967 919 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 ALBP02768 609 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 NCF1P14598 390 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-205ENST00000454542 EPORP19235 508 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 SCTRP47872 440 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 VSNL1P62760 191 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 SNRPNP63162 240 aaKnown RBP13.5□□□□□ -0.25
HDAC4-205ENST00000454542 CDC16Q13042 620 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 SLC29A2Q14542 456 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 ACAP2Q15057 778 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 TBR1Q16650 682 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 FAM83EQ2M2I3 478 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 LINC00303Q3SY05 128 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 CATSPEREQ5SY80 951 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 ATP1A1-AS1Q5TC04 95 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 WDR93Q6P2C0 686 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 PRMT9Q6P2P2 845 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 NXPE4Q6UWF7 544 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 TIFABQ6ZNK6 161 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 TMPRSS11BQ86T26 416 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 PLD6Q8N2A8 252 aaKnown RBP13.5□□□□□ -0.25
HDAC4-205ENST00000454542 DTWD1Q8N5C7 304 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 MFSD9Q8NBP5 474 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 MZB1Q8WU39 189 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 RERGQ96A58 199 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-205ENST00000454542 ALKBH8Q96BT7 664 aaKnown RBP13.5□□□□□ -0.25
HDAC4-205ENST00000454542 WDR34Q96EX3 536 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 TSNARE1Q96NA8 513 aa13.5□□□□□ -0.25
HDAC4-205ENST00000454542 SPSB2Q99619 263 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms