RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 POLE3Q9NRF9 147 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 SDR39U1Q9NRG7 319 aaPredicted RBP3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 PIGVQ9NUD9 493 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 POT1Q9NUX5 634 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 FAM118AQ9NWS6 357 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 MIS18AQ9NYP9 233 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 EXOC7Q9UPT5 735 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 TMED7Q9Y3B3 224 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZNF804BA4D1E1 1349 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 WDR33Q9C0J8 1336 aaKnown RBP3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 TRAV18A0A075B6X5 111 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 SLC15A5A6NIM6 579 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 H3BMM5 538 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 PEX11AO75192 247 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 AKR7A3O95154 331 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 PAPSS2O95340 614 aaPredicted RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 FSHBP01225 129 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 CDH1P12830 882 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 GP1BBP13224 206 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 NCF1P14598 390 aaPredicted RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 NR1D1P20393 614 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 CA4P22748 312 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 SRD5A2P31213 254 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 GNL1P36915 607 aaPredicted RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 USP8P40818 1118 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 MAGEA4P43358 317 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 PEX5P50542 639 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 FUT6P51993 359 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 SPP2Q13103 211 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZBTB17Q13105 803 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 TSTA3Q13630 321 aaPredicted RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 DPYSQ14117 519 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 ETFDHQ16134 617 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 ODF4Q2M2E3 257 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 GPR33Q49SQ1 333 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 DCAF10Q5QP82 559 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 CES4AQ5XG92 561 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 OLFM4Q6UX06 510 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 B3GLCTQ6Y288 498 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 CPEB2Q7Z5Q1 589 aaKnown RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 MRPL10Q7Z7H8 261 aaKnown RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 AMZ2Q86W34 360 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 LONP2Q86WA8 852 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 STHQ8IWL8 128 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 DCP1BQ8IZD4 617 aaKnown RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 EID3Q8N140 333 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZNF843Q8N446 348 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 KLHDC1Q8N7A1 406 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 OR1J1Q8NGS3 322 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 SMG7Q92540 1137 aaKnown RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 TRIM44Q96DX7 344 aaPredicted RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 DTNBP1Q96EV8 351 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 ABHD8Q96I13 439 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 NSMCE2Q96MF7 247 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 ALKBH7Q9BT30 221 aaPredicted RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 TRMT61BQ9BVS5 477 aaKnown RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZMYND12Q9H0C1 365 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 RAVER2Q9HCJ3 691 aaKnown RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 GPN1Q9HCN4 374 aaPredicted RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 OLFML3Q9NRN5 406 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 SLC35D1Q9NTN3 355 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 SLC38A7Q9NVC3 462 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 NDUFA13Q9P0J0 144 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 PTGFRNQ9P2B2 879 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 WNT16Q9UBV4 365 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 MALT1Q9UDY8 824 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 XPO7Q9UIA9 1087 aaKnown RBP3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 KCNJ14Q9UNX9 436 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 SH3GLB1Q9Y371 365 aa3.85□□□□□ -1.79
HMGN3P1-201ENST00000453847 A0A0U1RRA0 63 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 TRIM64CA6NLI5 447 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 SRRM4A7MD48 611 aaKnown RBP3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 C2CD4DB7Z1M9 353 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 B8ZZF3 427 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 SLC28A1O00337 649 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 PPEF2O14830 753 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 MAGEB2O15479 319 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 CTSVO60911 334 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 APOHP02749 345 aaPredicted RBP3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 CHRNGP07510 517 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 HOXC6P09630 235 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 TMEM191BP0C7N4 346 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 KRT5P13647 590 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZNF23P17027 643 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 MDH1P40925 334 aaKnown RBP3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 PITPNBP48739 271 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 PDX1P52945 283 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 MLLT10P55197 1068 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 HUNKP57058 714 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 RPS18P62269 152 aaKnown RBP3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZXDBP98169 803 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 LGALS3BPQ08380 585 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 ABRQ12979 859 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 HERC3Q15034 1050 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 HERC4Q5GLZ8 1057 aaPredicted RBP3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 PXDC1Q5TGL8 231 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 SLC25A24Q6NUK1 477 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 ANO5Q75V66 913 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 PPP1R42Q7Z4L9 355 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 TAF8Q7Z7C8 310 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms