RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 TRPC4Q9UBN4 977 aa17.07■□□□□ 0.32
CTNS-204ENST00000452111 CDC14AQ9UNH5 594 aa17.07■□□□□ 0.32
CTNS-204ENST00000452111 PCDHGB7Q9Y5F8 929 aa17.07■□□□□ 0.32
CTNS-204ENST00000452111 A0A0A6YYC8 382 aaPredicted RBP17.06■□□□□ 0.32
CTNS-204ENST00000452111 FEZF1A0PJY2 475 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 NPEPPSL1A6NEC2 478 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 I3L1I5 382 aaPredicted RBP17.06■□□□□ 0.32
CTNS-204ENST00000452111 EIF3HO15372 352 aaKnown RBP eCLIP17.06■□□□□ 0.32
CTNS-204ENST00000452111 PRPF4O43172 522 aaKnown RBP eCLIP17.06■□□□□ 0.32
CTNS-204ENST00000452111 DPM1O60762 260 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 ANXA5P08758 320 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 ENO2P09104 434 aaPredicted RBP17.06■□□□□ 0.32
CTNS-204ENST00000452111 PLTPP55058 493 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 RPS15AP62244 130 aaKnown RBP17.06■□□□□ 0.32
CTNS-204ENST00000452111 SNRPNP63162 240 aaKnown RBP17.06■□□□□ 0.32
CTNS-204ENST00000452111 FOXK1P85037 733 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 CBLBQ13191 982 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 DSG2Q14126 1118 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 ZXDCQ2QGD7 858 aaPredicted RBP17.06■□□□□ 0.32
CTNS-204ENST00000452111 VWA5B1Q5TIE3 1220 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 KIRREL2Q6UWL6 708 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 LCTLQ6UWM7 567 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 SBSNQ6UWP8 590 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 VN1R4Q7Z5H5 301 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 ARHGEF39Q8N4T4 335 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 CDKL2Q92772 493 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 VPS39Q96JC1 886 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 C16orf45Q96MC5 204 aaPredicted RBP17.06■□□□□ 0.32
CTNS-204ENST00000452111 SMAD5Q99717 465 aaKnown RBP17.06■□□□□ 0.32
CTNS-204ENST00000452111 MACROD1Q9BQ69 325 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 MESP1Q9BRJ9 268 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 DRC3Q9H069 523 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 RAB17Q9H0T7 212 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 ATP13A2Q9NQ11 1180 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 SEMA3GQ9NS98 782 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 LUZP4Q9P127 313 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 C3orf18Q9UK00 162 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 PLAAQ9Y263 795 aa17.06■□□□□ 0.32
CTNS-204ENST00000452111 MRPS2Q9Y399 296 aaKnown RBP17.06■□□□□ 0.32
CTNS-204ENST00000452111 TCRBV9S1A1TA0A576 114 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 TTLL8A6PVC2 850 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 CXorf49A8MYA2 514 aaPredicted RBP17.05■□□□□ 0.32
CTNS-204ENST00000452111 CDC7O00311 574 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 FOXS1O43638 330 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 NPPBP16860 134 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 ITGA3P26006 1051 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 BCL6P41182 706 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 AIMP2Q13155 320 aaKnown RBP17.05■□□□□ 0.32
CTNS-204ENST00000452111 MYBPC3Q14896 1274 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 TRADDQ15628 312 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 NDUFA9Q16795 377 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 SYT16Q17RD7 645 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 CCDC25Q86WR0 208 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 CEP97Q8IW35 865 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 NKAPQ8N5F7 415 aaKnown RBP17.05■□□□□ 0.32
CTNS-204ENST00000452111 AMER3Q8N944 861 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 OR56A3Q8NH54 315 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 FBXO25Q8TCJ0 367 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 ANKRD49Q8WVL7 239 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 ATL1Q8WXF7 558 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 FBXL8Q96CD0 374 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 PDLIM5Q96HC4 596 aaKnown RBP17.05■□□□□ 0.32
CTNS-204ENST00000452111 HAUS8Q9BT25 410 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 GPAMQ9HCL2 828 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 TXNDC16Q9P2K2 825 aa17.05■□□□□ 0.32
CTNS-204ENST00000452111 TNRC6AQ8NDV7 1962 aaKnown RBP17.05■□□□□ 0.32
CTNS-204ENST00000452111 IGLV3-12A0A075B6K2 115 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 KCNE1BA0A087WTH5 132 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 ALPPP05187 535 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 GRK3P35626 688 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 SLC26A3P40879 764 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 SLC12A2P55011 1212 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 MAT1AQ00266 395 aaKnown RBP17.04■□□□□ 0.32
CTNS-204ENST00000452111 MEF2AQ02078 507 aaPredicted RBP17.04■□□□□ 0.32
CTNS-204ENST00000452111 CKAP4Q07065 602 aaKnown RBP17.04■□□□□ 0.32
CTNS-204ENST00000452111 PPP1R3AQ16821 1122 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 TUBB8Q3ZCM7 444 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 C3orf62Q6ZUJ4 267 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 ZNF572Q7Z3I7 529 aaPredicted RBP17.04■□□□□ 0.32
CTNS-204ENST00000452111 LAPTM4BQ86VI4 370 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 RBMXL3Q8N7X1 1067 aaKnown RBP17.04■□□□□ 0.32
CTNS-204ENST00000452111 OR11G2Q8NGC1 345 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 ZCCHC10Q8TBK6 192 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 C8orf44Q96CB5 159 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 THAP11Q96EK4 314 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 OR4K3Q96R72 315 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 MCMBPQ9BTE3 642 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 UNKQ9C0B0 810 aaKnown RBP17.04■□□□□ 0.32
CTNS-204ENST00000452111 ZNF552Q9H707 407 aaPredicted RBP17.04■□□□□ 0.32
CTNS-204ENST00000452111 CAB39LQ9H9S4 337 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 MTO1Q9Y2Z2 717 aaKnown RBP17.04■□□□□ 0.32
CTNS-204ENST00000452111 NBASA2RRP1 2371 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 RELNP78509 3460 aa17.04■□□□□ 0.32
CTNS-204ENST00000452111 MYO18BQ8IUG5 2567 aa17.03■□□□□ 0.32
CTNS-204ENST00000452111 LCMT2O60294 686 aaKnown RBP17.03■□□□□ 0.32
CTNS-204ENST00000452111 ACPPP15309 386 aa17.03■□□□□ 0.32
CTNS-204ENST00000452111 AVPR1BP47901 424 aa17.03■□□□□ 0.32
CTNS-204ENST00000452111 CCR8P51685 355 aa17.03■□□□□ 0.32
CTNS-204ENST00000452111 GPX6P59796 221 aa17.03■□□□□ 0.32
CTNS-204ENST00000452111 CAV1Q03135 178 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms