RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ZNF639Q9UID6 485 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 PKP3Q9Y446 797 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GJA3Q9Y6H8 435 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 NDUFB9Q9Y6M9 179 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 RREB1Q92766 1687 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 RGPD1P0DJD0 1748 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 C2orf92A0A1B0GVN3 265 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 TMEM82A0PJX8 343 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 A8MVJ9 347 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CHURC1-FNTBB4DL54 471 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 H3BN98 237 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 J3QR89 54 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 POLRMTO00411 1230 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 CDK2AP1O14519 115 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 KIAA0513O60268 411 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 PLA2G6O60733 806 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 RSL1D1O76021 490 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 TOX4O94842 621 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GLP2RO95838 553 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CRYABP02511 175 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 JUNP05412 331 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 GIPP09681 153 aaPredicted RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 PRPS2P11908 318 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SLC2A4P14672 509 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CYP2F1P24903 491 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 FMO3P31513 532 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 BTDP43251 543 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 MAGEB1P43366 347 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 KCNJ5P48544 419 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 RBP2P50120 134 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CCR4P51679 360 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 KIAA1024LP59773 190 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 REEP5Q00765 189 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 FMO1Q01740 532 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 RELQ04864 619 aaPredicted RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 DDX39BQ13838 428 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 OPCMLQ14982 345 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SEC23BQ15437 767 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 C3orf38Q5JPI3 329 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 AFMIDQ63HM1 303 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SLC25A25Q6KCM7 469 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GPAT2Q6NUI2 795 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 TEX261Q6UWH6 196 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ISLR2Q6UXK2 745 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 LINGO4Q6UY18 593 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ZNF852Q6ZMS4 543 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 KCTD1Q719H9 257 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SHFQ7M4L6 423 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 TIPARPQ7Z3E1 657 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 ZER1Q7Z7L7 766 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 TMPRSS11BQ86T26 416 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 OAFQ86UD1 273 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ZSWIM9Q86XI8 627 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SLC24A4Q8NFF2 622 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CANT1Q8WVQ1 401 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 FCAMRQ8WWV6 532 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 BSNDQ8WZ55 320 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 YIPF5Q969M3 257 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 PDXPQ96GD0 296 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ZNF594Q96JF6 807 aaPredicted RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 FCRL3Q96P31 734 aaPredicted RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 OR5B12Q96R08 314 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ZNF607Q96SK3 696 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 PKP4Q99569 1192 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 LXNQ9BS40 222 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 PI4K2AQ9BTU6 479 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ZNF471Q9BX82 626 aaPredicted RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 OR51M1Q9H341 326 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 RERGLQ9H628 205 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 POPDC3Q9HBV1 291 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 RANGRFQ9HD47 186 aaPredicted RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 NT5MQ9NPB1 228 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 MED9Q9NWA0 146 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 TRPS1Q9UHF7 1281 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 OSGIN1Q9UJX0 560 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CNTN6Q9UQ52 1028 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ERVK-19Q9WJR5 959 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 U3KQ87 197 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 QSER1Q2KHR3 1735 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 TEX13CA0A0J9YWL9 993 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 IQCMA0A1B0GVH7 501 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GXYLT2A0PJZ3 443 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 LRRC14BA6NHZ5 514 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 FOXO6A8MYZ6 492 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 FKTNO75072 461 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 DGAT1O75907 488 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF432O94892 652 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MATN4O95460 622 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TRUB2O95900 331 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 TFP02787 698 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 RLN1P04808 185 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ALPLP05186 524 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ADH1AP07327 375 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SPATA31D3P0C874 917 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZBTB48P10074 688 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 HOXD8P13378 290 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 HGFP14210 728 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GM2AP17900 193 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TFEBP19484 476 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 HNF1AP20823 631 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms